RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 C11orf65Q8NCR3 313 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 OR52N2Q8NGI0 321 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 MOAP1Q96BY2 351 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 MIEF2Q96C03 454 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 SDCCAG3Q96C92 435 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 MS4A6EQ96DS6 147 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 CNDP2Q96KP4 475 aaKnown RBP9.74□□□□□ -0.85
HDAC3-214ENST00000495485 NR1H4Q96RI1 486 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-214ENST00000495485 SLC38A3Q99624 504 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 PKP2Q99959 881 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 DPYSL5Q9BPU6 564 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 C17orf62Q9BQA9 187 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 SLC35A5Q9BS91 424 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 SLC6A16Q9GZN6 736 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 TWSG1Q9GZX9 223 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 EPB41L1Q9H4G0 881 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 FSCN3Q9NQT6 498 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 ADPRHL2Q9NX46 363 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 RIMS3Q9UJD0 308 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 RAB26Q9ULW5 256 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 FAF1Q9UNN5 650 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-214ENST00000495485 ENTPD4Q9Y227 616 aa9.74□□□□□ -0.85
HDAC3-214ENST00000495485 A0A0A6YYD5 115 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 RNF103-CHMP3A0A140T963 221 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 TCRBV5S2A0A599 114 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 EME2A4GXA9 379 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 OR5K3A6NET4 321 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 B4DGG1 531 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 GNGT2O14610 69 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 YY2O15391 372 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 NUDT21O43809 227 aaKnown RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 KCNK5O95279 499 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 BMP10O95393 424 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 C6orf47O95873 294 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 UQCRBP14927 111 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 GLB1P16278 677 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 NCK1P16333 377 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 HOXB9P17482 250 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ATP5A1P25705 553 aaKnown RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 PTPN6P29350 595 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 MPIP34949 423 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 GPC1P35052 558 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 CDKN2CP42773 168 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 CRATP43155 626 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 GPR3P46089 330 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 PPM1FP49593 454 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 NOVA1P51513 510 aaKnown RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ARHGDIAP52565 204 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 EPHA4P54764 986 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 DAB2P98082 770 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 FOXK2Q01167 660 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 SLAMF1Q13291 335 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 C1orf61Q13536 156 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 SPIDRQ14159 915 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 SELPLGQ14242 412 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 GNA13Q14344 377 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 RGNQ15493 299 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 TCEA2Q15560 299 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 NDUFA9Q16795 377 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 LRRC36Q1X8D7 754 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ZNF630Q2M218 657 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 SPDYE7PQ495Y7 208 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ZNF542PQ5EBM4 170 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 LPCAT4Q643R3 524 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 IRGCQ6NXR0 463 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ABHD17CQ6PCB6 329 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ZBTB49Q6ZSB9 765 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 C17orf82Q86X59 251 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 PLD3Q8IV08 490 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ADGRG5Q8IZF4 528 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 CLECL1Q8IZS7 167 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 CARFQ8N187 725 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 DTWD1Q8N5C7 304 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 EID2Q8N6I1 236 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ACOT4Q8N9L9 421 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 TMEM102Q8N9M5 508 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ZFP90Q8TF47 636 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 LRTOMTQ8WZ04 291 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 LZICQ8WZA0 190 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 TM4SF19Q96DZ7 209 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 BBS4Q96RK4 519 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 SERINC2Q96SA4 455 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 CCDC3Q9BQI4 270 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 BATF3Q9NR55 127 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 SEMA3GQ9NS98 782 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 DCAF13Q9NV06 445 aaKnown RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 EPHA6Q9UF33 1036 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 PNMA8BQ9ULN7 279 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-214ENST00000495485 PADI4Q9UM07 663 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 CHD8Q9HCK8 2581 aa9.73□□□□□ -0.85
HDAC3-214ENST00000495485 ACACBO00763 2458 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 PRAMEF33A0A0G2JMD5 474 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 RHPN2P1A8MT19 583 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 TMX2-CTNND1H3BSU7 103 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 CLOCKO15516 846 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 SIGLEC6O43699 453 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 B3GALT2O43825 422 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 SRPX2O60687 465 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-214ENST00000495485 SDC3O75056 442 aa9.72□□□□□ -0.85
HDAC3-214ENST00000495485 TIPRLO75663 272 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms