RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 FAM219BQ5XKK7 198 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ZNF574Q6ZN55 896 aaPredicted RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ADCK2Q7Z695 626 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 PATL1Q86TB9 770 aaKnown RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ANKRD46Q86W74 232 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 CARM1Q86X55 608 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 CHERPQ8IWX8 916 aaKnown RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ZZZ3Q8IYH5 903 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 LMNTD1Q8N9Z9 388 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ST13P5Q8NFI4 369 aaPredicted RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 OR52E1Q8NGJ3 308 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 OR2A1Q8NGT9 310 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 OR5K1Q8NHB7 308 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 RPLP0P6Q8NHW5 317 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 FBXO30Q8TB52 745 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 PNPT1Q8TCS8 783 aaKnown RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ZFP90Q8TF47 636 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 GFM2Q969S9 779 aaKnown RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 RMND5BQ96G75 393 aaPredicted RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 SHDQ96IW2 340 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 VPS50Q96JG6 964 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 CNBD2Q96M20 576 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 KCNC2Q96PR1 638 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ZNF347Q96SE7 839 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 NELL2Q99435 816 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 MENTQ9BUN1 341 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ADI1Q9BV57 179 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 GSDMCQ9BYG8 508 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 KRTAP9-2Q9BYQ4 174 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 FOXQ1Q9C009 403 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 PIF1Q9H611 641 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 CLK4Q9HAZ1 481 aaKnown RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 TM9SF3Q9HD45 589 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 IL1RAPQ9NPH3 570 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 GIMAP4Q9NUV9 329 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 LYARQ9NX58 379 aaKnown RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 USP36Q9P275 1121 aaKnown RBP9.54□□□□□ -0.88
PRPF3-206ENST00000493553 C3orf18Q9UK00 162 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 KCNK6Q9Y257 313 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ANGPT4Q9Y264 503 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 NEUROG3Q9Y4Z2 214 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 SNX11Q9Y5W9 270 aa9.54□□□□□ -0.88
PRPF3-206ENST00000493553 ATG2AQ2TAZ0 1938 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 C1orf226A1L170 272 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 KRT87PA6NCN2 255 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 H7BY64 318 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 PDPK1O15530 556 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SUV39H1O43463 412 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 RASGRP1O95267 797 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SERPINA1P01009 418 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 GSNP06396 782 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 F3P13726 295 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 TTKP33981 857 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 BSGP35613 385 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 ARSFP54793 590 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 NR1H2P55055 460 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SRP54P61011 504 aaKnown RBP9.53□□□□□ -0.88
PRPF3-206ENST00000493553 RGS1Q08116 209 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 BNIP3Q12983 259 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 TDGQ13569 410 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SLC9A5Q14940 896 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SF1Q15637 639 aaKnown RBP9.53□□□□□ -0.88
PRPF3-206ENST00000493553 MLF2Q15773 248 aaPredicted RBP9.53□□□□□ -0.88
PRPF3-206ENST00000493553 ADPRMQ3LIE5 342 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SLC44A4Q53GD3 710 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 C6orf52Q5T4I8 152 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 KIAA0895LQ68EN5 471 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 OR4C11Q6IEV9 310 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 OR52E8Q6IFG1 317 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 ENPP7Q6UWV6 458 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 CCDC80Q76M96 950 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SYT13Q7L8C5 426 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 GPR155Q7Z3F1 870 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 ABI3BPQ7Z7G0 1075 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 AMIGO1Q86WK6 493 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 TRIM48Q8IWZ4 208 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 CLEC4FQ8N1N0 589 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 ZNF655Q8N720 491 aaPredicted RBP9.53□□□□□ -0.88
PRPF3-206ENST00000493553 MFSD9Q8NBP5 474 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 ZNF555Q8NEP9 628 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 RASSF5Q8WWW0 418 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 KLK6Q92876 244 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 MIEF2Q96C03 454 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 HRASLS5Q96KN8 279 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 PRAP1Q96NZ9 151 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SLC29A1Q99808 456 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 ACAT2Q9BWD1 397 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SRMSQ9H3Y6 488 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 FGF22Q9HCT0 170 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 TM7SF3Q9NS93 570 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 SEMA3GQ9NS98 782 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 POT1Q9NUX5 634 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 CIDEBQ9UHD4 219 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 ENOPH1Q9UHY7 261 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 PLAGL1Q9UM63 463 aa9.53□□□□□ -0.88
PRPF3-206ENST00000493553 A0A087WXM4 84 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 DPPA5A6NC42 116 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 PLPP1O14494 284 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 SOCS2O14508 198 aa9.52□□□□□ -0.89
PRPF3-206ENST00000493553 EI24O14681 340 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms