RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 ARF3P61204 181 aaPredicted RBP8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 PPP1CAP62136 330 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 TNFRSF17Q02223 184 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 DMWDQ09019 674 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 BLMHQ13867 455 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SCARB2Q14108 478 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SPIDRQ14159 915 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 ELOAQ14241 798 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 C16orf72Q14CZ0 275 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 PDK3Q15120 406 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 C6orf52Q5T4I8 152 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 FAM180BQ6P0A1 224 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SLC48A1Q6P1K1 146 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 TMEM64Q6YI46 380 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 ZDHHC21Q8IVQ6 265 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SVOPLQ8N434 492 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 C19orf47Q8N9M1 422 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 NFKBIDQ8NI38 313 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 PSMA8Q8TAA3 256 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 C1orf216Q8TAB5 229 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SFXN5Q8TD22 340 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 UCN3Q969E3 161 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 MAL2Q969L2 176 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 TMBIM1Q969X1 311 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SMIM10Q96HG1 83 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 HSH2DQ96JZ2 352 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SLC35G5Q96KT7 338 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 AMDHD1Q96NU7 426 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SLC38A3Q99624 504 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 MAPKAP1Q9BPZ7 522 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 CCDC3Q9BQI4 270 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 TMEM121BQ9BXQ6 578 aaPredicted RBP8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 DUSP15Q9H1R2 295 aaPredicted RBP8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 GLIPR2Q9H4G4 154 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 BATF3Q9NR55 127 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SEMA3GQ9NS98 782 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 GPATCH2Q9NW75 528 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 ADPRHL2Q9NX46 363 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 ZNF639Q9UID6 485 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 PADI4Q9UM07 663 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 SNX11Q9Y5W9 270 aa8.66□□□□□ -1.02
SMARCC1-208ENST00000492896 GON4LQ3T8J9 2241 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 GLOD5A6NK44 160 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 EIF4E1BA6NMX2 242 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 MYO1GB0I1T2 1018 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 LMO7DNF2Z398 122 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 UPK1AO00322 258 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 GNGT2O14610 69 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 BCAT2O15382 392 aaPredicted RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 ZSCAN9O15535 394 aaPredicted RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 SUV39H1O43463 412 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 PROM1O43490 865 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 SH3BP5O60239 455 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 ERAL1O75616 437 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 PIAS2O75928 621 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 UBXN7O94888 489 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 HPRP00739 348 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 SEMG1P04279 462 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 FABP3P05413 133 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 LYNP07948 512 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 ST6GAL1P15907 406 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 ALOX12P18054 663 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CSNK2A2P19784 350 aaPredicted RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CPN2P22792 545 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 AQP1P29972 269 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CAPZBP47756 277 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 AFF3P51826 1226 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CASP9P55211 416 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CDK6Q00534 326 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 EEF1A2Q05639 463 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 DAG1Q14118 895 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 SIM2Q14190 667 aaPredicted RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 C14orf28Q4W4Y0 310 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CYBRD1Q53TN4 286 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 MANEAQ5SRI9 462 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 C18orf63Q68DL7 685 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CWF19L1Q69YN2 538 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 OR52E8Q6IFG1 317 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 FRMPD2BQ6IN97 320 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CEACAM20Q6UY09 585 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CCDC80Q76M96 950 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 DGLUCYQ7Z3D6 616 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 GALNT10Q86SR1 603 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 C17orf82Q86X59 251 aaPredicted RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CHERPQ8IWX8 916 aaKnown RBP8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CSNK1A1LQ8N752 337 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 OR5K1Q8NHB7 308 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 GATA6Q92908 595 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 MOAP1Q96BY2 351 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CNBD2Q96M20 576 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 NTN4Q9HB63 628 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 A4GALTQ9NPC4 353 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 PRDM9Q9NQV7 894 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 C1GALT1Q9NS00 363 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 SCOCQ9UIL1 159 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 SPACA6W5XKT8 324 aa8.65□□□□□ -1.02
SMARCC1-208ENST00000492896 CACNA1IQ9P0X4 2223 aa8.64□□□□□ -1.03
SMARCC1-208ENST00000492896 LOC105369274A0A096LPK9 316 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms