RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ASB18Q6ZVZ8 466 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 OR4N5Q8IXE1 308 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 C7orf57Q8NEG2 295 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 APIPQ96GX9 242 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 NUDT9Q9BW91 350 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 SEMA4CQ9C0C4 833 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 TP53TG5Q9Y2B4 290 aa13.1□□□□□ -0.31
CCM2-217ENST00000492883 USP24Q9UPU5 2620 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 MDC1Q14676 2089 aaKnown RBP13.09□□□□□ -0.31
CCM2-217ENST00000492883 UQCRHLA0A096LP55 91 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 GNG14A0A1W2PPG7 69 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 SYNDIG1LA6NDD5 238 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 GLOD5A6NK44 160 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 TMEM233B4DJY2 109 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 K7EM74 188 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 RGS14O43566 566 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 ITM2AO43736 263 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 PCDH7O60245 1069 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 PRKRAO75569 313 aaKnown RBP13.09□□□□□ -0.31
CCM2-217ENST00000492883 LYPLA1O75608 230 aaPredicted RBP13.09□□□□□ -0.31
CCM2-217ENST00000492883 RSL1D1O76021 490 aaKnown RBP13.09□□□□□ -0.31
CCM2-217ENST00000492883 MYO1DO94832 1006 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 AIFM1O95831 613 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 CELA2AP08217 269 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 LINC00032P0C843 101 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 PPP2R1BP30154 601 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 SLC1A6P48664 564 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 AGAP7PQ5VUJ5 663 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 PLAG1Q6DJT9 500 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 RIPOR1Q6ZS17 1223 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 DDIASQ8IXT1 998 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 AMER2Q8N7J2 671 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 TWIST2Q8WVJ9 160 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 ANKRD9Q96BM1 317 aaPredicted RBP13.09□□□□□ -0.31
CCM2-217ENST00000492883 RBM18Q96H35 190 aaKnown RBP13.09□□□□□ -0.31
CCM2-217ENST00000492883 AGAP4Q96P64 663 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 SH3GL2Q99962 352 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 WDR77Q9BQA1 342 aaPredicted RBP13.09□□□□□ -0.31
CCM2-217ENST00000492883 ILKAPQ9H0C8 392 aaPredicted RBP13.09□□□□□ -0.31
CCM2-217ENST00000492883 ACBD3Q9H3P7 528 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 ZNF552Q9H707 407 aaPredicted RBP13.09□□□□□ -0.31
CCM2-217ENST00000492883 ZDHHC2Q9UIJ5 367 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 ZNF451Q9Y4E5 1061 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 PCDHGB7Q9Y5F8 929 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 DNAJC15Q9Y5T4 150 aa13.09□□□□□ -0.31
CCM2-217ENST00000492883 WASHC1A8K0Z3 465 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 A8MUI8 341 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
CCM2-217ENST00000492883 TGFBR3LH3BV60 316 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 FGF17O60258 216 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 SEC22BO75396 215 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 NR1D1P20393 614 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 ARRB2P32121 409 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 SLC26A5P58743 744 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 TRA2BP62995 288 aaKnown RBP13.08□□□□□ -0.32
CCM2-217ENST00000492883 FOLH1Q04609 750 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 NFATC3Q12968 1075 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 BIKQ13323 160 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 TTMPQ5BVD1 217 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 NDUFAF5Q5TEU4 345 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 VWA5B1Q5TIE3 1220 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 JMJD6Q6NYC1 403 aaPredicted RBP13.08□□□□□ -0.32
CCM2-217ENST00000492883 ATG14Q6ZNE5 492 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 M1APQ8TC57 530 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 BRIX1Q8TDN6 353 aaKnown RBP13.08□□□□□ -0.32
CCM2-217ENST00000492883 UCN3Q969E3 161 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 TM4SF18Q96CE8 201 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 DGAT2Q96PD7 388 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 SMAD5Q99717 465 aaKnown RBP13.08□□□□□ -0.32
CCM2-217ENST00000492883 FAIM2Q9BWQ8 316 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 TUBB1Q9H4B7 451 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 ZNF395Q9H8N7 513 aaPredicted RBP13.08□□□□□ -0.32
CCM2-217ENST00000492883 KCNK13Q9HB14 408 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 ADAP2Q9NPF8 381 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 TEX10Q9NXF1 929 aaPredicted RBP13.08□□□□□ -0.32
CCM2-217ENST00000492883 PTGFRNQ9P2B2 879 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 VTI1BQ9UEU0 232 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 CLDN16Q9Y5I7 305 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 PTGDR2Q9Y5Y4 395 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 CLCA3PQ9Y6N3 262 aa13.08□□□□□ -0.32
CCM2-217ENST00000492883 C1orf226A1L170 272 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 SAGE2PA6NJ88 616 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 PIP5K1BO14986 540 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 PGRMC2O15173 223 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 SASH3O75995 380 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 SNUPNO95149 360 aaKnown RBP13.07□□□□□ -0.32
CCM2-217ENST00000492883 GPR75O95800 540 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 PDGFAP04085 211 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 PRB1P04280 392 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 ANXA4P09525 319 aaPredicted RBP13.07□□□□□ -0.32
CCM2-217ENST00000492883 ITGAMP11215 1152 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 PIK3R1P27986 724 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 TIA1P31483 386 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCM2-217ENST00000492883 ALDH9A1P49189 494 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 RAE1P78406 368 aaKnown RBP13.07□□□□□ -0.32
CCM2-217ENST00000492883 NR6A1Q15406 480 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 ELAVL1Q15717 326 aaKnown RBP13.07□□□□□ -0.32
CCM2-217ENST00000492883 UGT3A2Q3SY77 523 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 CES4AQ5XG92 561 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms