RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 RAP1GDS1P52306 607 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 RNF4P78317 190 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 PLGLB1Q02325 96 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 SLAMF1Q13291 335 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 ACAP2Q15057 778 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 MPEG1Q2M385 716 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 PRAMEF9Q5VWM5 478 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 GRHL2Q6ISB3 625 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 IL20RBQ6UXL0 311 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 GK5Q6ZS86 529 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 CHERPQ8IWX8 916 aaKnown RBP11.57□□□□□ -0.56
COL6A1-205ENST00000492851 DND1Q8IYX4 353 aaKnown RBP11.57□□□□□ -0.56
COL6A1-205ENST00000492851 EXT2Q93063 718 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 DGAT2Q96PD7 388 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 RASL10BQ96S79 203 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 DMRTA2Q96SC8 542 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 ATOH8Q96SQ7 321 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 CSF3RQ99062 836 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 FAM173AQ9BQD7 235 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 PELOQ9BRX2 385 aaKnown RBP11.57□□□□□ -0.56
COL6A1-205ENST00000492851 OR8D2Q9GZM6 311 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 ZGRF1Q86YA3 2104 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 OR14I1A6ND48 311 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 TMEM200CA6NKL6 621 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 TGFBR3LH3BV60 316 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 WWP2O00308 870 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 P04436 131 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 GFAPP14136 432 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 CAPN3P20807 821 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 PTGER1P34995 402 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 BUD31P41223 144 aaPredicted RBP11.56□□□□□ -0.56
COL6A1-205ENST00000492851 STT3AP46977 705 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 HK2P52789 917 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 ALDH18A1P54886 795 aaKnown RBP11.56□□□□□ -0.56
COL6A1-205ENST00000492851 GPR85P60893 370 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 PPIAP62937 165 aaKnown RBP11.56□□□□□ -0.56
COL6A1-205ENST00000492851 HSF1Q00613 529 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 CKAP4Q07065 602 aaKnown RBP11.56□□□□□ -0.56
COL6A1-205ENST00000492851 C2orf54Q08AI8 447 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 CMPK2Q5EBM0 449 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 FBXO48Q5FWF7 155 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 C10orf62Q5T681 223 aaPredicted RBP11.56□□□□□ -0.56
COL6A1-205ENST00000492851 ACAD11Q709F0 780 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 UBE3DQ7Z6J8 389 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 GPR180Q86V85 440 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 ZCCHC7Q8N3Z6 543 aaKnown RBP11.56□□□□□ -0.56
COL6A1-205ENST00000492851 SLC15A4Q8N697 577 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 OR2M7Q8NG81 312 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 NUBPLQ8TB37 319 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 SLC2A12Q8TD20 617 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 MAPKAP1Q9BPZ7 522 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 RPF2Q9H7B2 306 aaKnown RBP11.56□□□□□ -0.56
COL6A1-205ENST00000492851 ACTR8Q9H981 624 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 IGSF5Q9NSI5 407 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 SACM1LQ9NTJ5 587 aa11.56□□□□□ -0.56
COL6A1-205ENST00000492851 FOXO6A8MYZ6 492 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 H0YIV9 168 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 UBXN8O00124 270 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 ADAM10O14672 748 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 BCKDKO14874 412 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 FANCGO15287 622 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 PRKNO60260 465 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-205ENST00000492851 LDB3O75112 727 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 FAM155BO75949 473 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 OR6B1O95007 311 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 KLHL2O95198 593 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 C2P06681 752 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 SOX3P41225 446 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 IGLV3-21P80748 117 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-205ENST00000492851 PLIN5Q00G26 463 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 GUCY2DQ02846 1103 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 CUL3Q13618 768 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 SETDB1Q15047 1291 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 HYAL4Q2M3T9 481 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 PIGGQ5H8A4 983 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 ADNP2Q6IQ32 1131 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 ZNF793Q6ZN11 406 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 ZNF572Q7Z3I7 529 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-205ENST00000492851 FGD2Q7Z6J4 655 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 CMC1Q7Z7K0 106 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 TEX9Q8N6V9 391 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 OR52N2Q8NGI0 321 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 HUS1BQ8NHY5 278 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 SLC22A8Q8TCC7 542 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 RND1Q92730 232 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 ANKRD9Q96BM1 317 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-205ENST00000492851 SDCCAG3Q96C92 435 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 NXNL1Q96CM4 212 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 C14orf79Q96F83 325 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 SENP5Q96HI0 755 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-205ENST00000492851 OR51B5Q9H339 312 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 ZDHHC11Q9H8X9 412 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 WDR41Q9HAD4 459 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 IL1RL2Q9HB29 575 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 SLC24A3Q9HC58 644 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 TMCO1Q9UM00 188 aa11.55□□□□□ -0.56
COL6A1-205ENST00000492851 LRBAP50851 2863 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 A0A096LPK6 155 aa11.54□□□□□ -0.56
COL6A1-205ENST00000492851 IQANK1A0A1B0GTG1 560 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms