RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 RIPK2O43353 540 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 NME2P1O60361 137 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 ITGA10O75578 1167 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 TNNI3P19429 210 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 NME2P22392 152 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 ALDH6A1Q02252 535 aaKnown RBP25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 RBPJQ06330 500 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 ADGRD1Q6QNK2 874 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 GPR180Q86V85 440 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 CNPY4Q8N129 248 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 TMEM156Q8N614 296 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 ANKRD9Q96BM1 317 aaPredicted RBP25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 RPF2Q9H7B2 306 aaKnown RBP25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 PPT2Q9UMR5 302 aa25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 YARS2Q9Y2Z4 477 aaKnown RBP25.25■■□□□ 1.63
SH3GL3-204ENST00000492099 UTP20O75691 2785 aaKnown RBP25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 A1L4Q6 167 aa25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 SRSF11Q05519 484 aaKnown RBP25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 KRTCAP3Q53RY4 240 aa25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 C10orf62Q5T681 223 aaPredicted RBP25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 HSDL2Q6YN16 418 aa25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 PNPLA5Q7Z6Z6 429 aaPredicted RBP25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 ZNF227Q86WZ6 799 aa25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 OR52B6Q8NGF0 335 aa25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 TANKQ92844 425 aa25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 FRMD6Q96NE9 622 aa25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 CDK15Q96Q40 435 aa25.24■■□□□ 1.63
SH3GL3-204ENST00000492099 MYOCOSA0A1B0GUC4 107 aa25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 C17orf105B2RV13 164 aa25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 COX7A2P14406 83 aa25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 GCAP28676 217 aa25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 BUD31P41223 144 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 NEK2P51955 445 aa25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 MAMDC2Q7Z304 686 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 LCA5Q86VQ0 697 aa25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 RELTQ969Z4 430 aa25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 SERPINI1Q99574 410 aa25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 OR8D2Q9GZM6 311 aa25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 DDX31Q9H8H2 851 aaKnown RBP25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 LYARQ9NX58 379 aaKnown RBP25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 KLF13Q9Y2Y9 288 aaPredicted RBP25.23■■□□□ 1.63
SH3GL3-204ENST00000492099 FGF17O60258 216 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 SSR4P51571 173 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 IGLV3-21P80748 117 aaPredicted RBP25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 TNFRSF17Q02223 184 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 ID2Q02363 134 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 C1QL3Q5VWW1 255 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 TTC19Q6DKK2 380 aaPredicted RBP25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 MILR1Q7Z6M3 343 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 CYP4Z2PQ8N1L4 340 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 OR8K3Q8NH51 312 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 GPR137Q96N19 417 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 NSUN5Q96P11 429 aaKnown RBP25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 ZNF717Q9BY31 904 aaPredicted RBP25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 ZBTB26Q9HCK0 441 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 MYOTQ9UBF9 498 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 FETUBQ9UGM5 382 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 ATG4BQ9Y4P1 393 aa25.22■■□□□ 1.63
SH3GL3-204ENST00000492099 A0A0A6YYD5 115 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 IQANK1A0A1B0GTG1 560 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 PROM1O43490 865 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 DYRK3O43781 588 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 PRKNO60260 465 aaPredicted RBP25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 SEMA3DO95025 777 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 RPS17P08708 135 aaKnown RBP25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 FAM153BP0C7A2 387 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 BSGP35613 385 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 STT3AP46977 705 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 HNRNPH2P55795 449 aaKnown RBP25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 TRAF3Q13114 568 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 FAM153CQ494X1 144 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 GGTA1PQ4G0N0 100 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 FRG2Q64ET8 278 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 MRM1Q6IN84 353 aaKnown RBP25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 CYP20A1Q6UW02 462 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 FJX1Q86VR8 437 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 GPALPP1Q8IXQ4 340 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 TMEM151AQ8N4L1 468 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 SLC2A12Q8TD20 617 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 MTFMTQ96DP5 389 aaKnown RBP25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 RBM18Q96H35 190 aaKnown RBP25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 DGAT2Q96PD7 388 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 FRG2BQ96QU4 278 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 TXLNGYQ9BZA5 131 aa25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 SEMA4BQ9NPR2 832 aaPredicted RBP25.21■■□□□ 1.63
SH3GL3-204ENST00000492099 TMEM200CA6NKL6 621 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 KLRC4-KLRK1H3BQV0 150 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 EEDO75530 441 aaKnown RBP25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 ETHE1O95571 254 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 CLDN1O95832 211 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 OTCP00480 354 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 SBK3P0C264 359 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 TAC1P20366 129 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 IFT88Q13099 833 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 SLC29A2Q14542 456 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 C18orf63Q68DL7 685 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 NUDT13Q86X67 352 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 OR4N5Q8IXE1 308 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 POGLUT1Q8NBL1 392 aa25.2■■□□□ 1.62
SH3GL3-204ENST00000492099 OR5L2Q8NGL0 311 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms