RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 BICRALQ6AI39 1079 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 KRT78Q8N1N4 520 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 ARMC10Q8N2F6 343 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 GHDCQ8N2G8 530 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 NOA1Q8NC60 698 aaKnown RBP8.25□□□□□ -1.09
HDAC3-211ENST00000491581 PSD4Q8NDX1 1056 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 OR52B6Q8NGF0 335 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 OR5M3Q8NGP4 307 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 HUS1BQ8NHY5 278 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 LURAP1Q96LR2 239 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 RUNDC3BQ96NL0 473 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 GPR78Q96P69 363 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 NT5DC2Q9H857 520 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 ADAP2Q9NPF8 381 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 NPDC1Q9NQX5 325 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-211ENST00000491581 SNX15Q9NRS6 342 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 ZDHHC18Q9NUE0 388 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 TUBA8Q9NY65 449 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-211ENST00000491581 NINJ2Q9NZG7 142 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 GPRC5BQ9NZH0 403 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 CPSF2Q9P2I0 782 aaKnown RBP8.25□□□□□ -1.09
HDAC3-211ENST00000491581 TXNDC16Q9P2K2 825 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 MYOTQ9UBF9 498 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 RNF14Q9UBS8 474 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 MMACHCQ9Y4U1 282 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 PCDHGB6Q9Y5F9 930 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 DCHS2Q6V1P9 2916 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF407Q9C0G0 2248 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 PCNX1Q96RV3 2341 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 PHF3Q92576 2039 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 A0A1W2PR48 441 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 A8MVJ9 347 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 FOXO6A8MYZ6 492 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 K7EPI3 171 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 CLDN4O14493 209 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 FCHO1O14526 889 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 OR7A17O14581 309 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 KERAO60938 352 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ZFAND5O76080 213 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 CLDN14O95500 239 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ALDOAP04075 364 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 S100BP04271 92 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 LTA4HP09960 611 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 CT62P0C5K7 136 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 COX6B1P14854 86 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ENDOUP21128 410 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 HIST1H1TP22492 207 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 CPN2P22792 545 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 SPRP35270 261 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 PTGS2P35354 604 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 NUP107P57740 925 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ATP6V0D1P61421 351 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 PPIAP62937 165 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 PLGLB1Q02325 96 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 FOLH1Q04609 750 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 STX4Q12846 297 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 NAA30Q147X3 362 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ELAVL1Q15717 326 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 CPSF6Q16630 551 aaKnown RBP eCLIP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 KRTCAP3Q53RY4 240 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 KHDRBS2Q5VWX1 349 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 MED27Q6P2C8 311 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 LYPD8Q6UX82 237 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 LRRC70Q7Z2Q7 622 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 GOLGA7Q7Z5G4 137 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 LIX1LQ8IVB5 337 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF595Q8IYB9 648 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 LAS2Q8IYD9 372 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 LGI4Q8N135 537 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 TMEM251Q8N6I4 163 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ZFP62Q8NB50 900 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 FAM98AQ8NCA5 519 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ARMC2Q8NEN0 867 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 C16orf52Q8NHV5 167 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 FAM57AQ8TBR7 257 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ASB15Q8WXK1 588 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 CDKL2Q92772 493 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 TMEM125Q96AQ2 219 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 TSPAN17Q96FV3 270 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 HBEGFQ99075 208 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 NPLQ9BXD5 320 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 TTTY12Q9BZ98 90 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 VPS11Q9H270 941 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 PROK2Q9HC23 129 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 DMRT3Q9NQL9 472 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 FARSBQ9NSD9 589 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 HPF1Q9NWY4 346 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 TEX10Q9NXF1 929 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 NSMCE4AQ9NXX6 385 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 NUDT4Q9NZJ9 180 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 SPRR3Q9UBC9 169 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 OPTCQ9UBM4 332 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 VTI1BQ9UEU0 232 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 DMGDHQ9UI17 866 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 PPIEQ9UNP9 301 aaKnown RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 RNF6Q9Y252 685 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 KLF13Q9Y2Y9 288 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-211ENST00000491581 CLCA3PQ9Y6N3 262 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 ARHGAP21Q5T5U3 1957 aa8.24□□□□□ -1.09
HDAC3-211ENST00000491581 APCP25054 2843 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms