RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ATP4BP51164 291 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 NLRP11P59045 1033 aaKnown RBP2.84□□□□□ -1.95
PHC3-213ENST00000491258 SETQ01105 290 aaPredicted RBP2.84□□□□□ -1.95
PHC3-213ENST00000491258 AKAP17AQ02040 695 aaKnown RBP2.84□□□□□ -1.95
PHC3-213ENST00000491258 HERC4Q5GLZ8 1057 aaPredicted RBP2.84□□□□□ -1.95
PHC3-213ENST00000491258 SNX30Q5VWJ9 437 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 BLOC1S2Q6QNY1 142 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 CHST9Q7L1S5 443 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 ADGRD2Q7Z7M1 963 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 FAM228AQ86W67 206 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 ZC3H3Q8IXZ2 948 aaKnown RBP2.84□□□□□ -1.95
PHC3-213ENST00000491258 METTL13Q8N6R0 699 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 VN1R2Q8NFZ6 395 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 AGAP11Q8TF27 550 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 CCDC12Q8WUD4 166 aaPredicted RBP2.84□□□□□ -1.95
PHC3-213ENST00000491258 ZNF274Q96GC6 653 aaPredicted RBP2.84□□□□□ -1.95
PHC3-213ENST00000491258 C4orf45Q96LM5 186 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 FAM20AQ96MK3 541 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 MBOAT7Q96N66 472 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 CASD1Q96PB1 797 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 RIT2Q99578 217 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 TMEM117Q9H0C3 514 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 UNC45AQ9H3U1 944 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 TLE6Q9H808 572 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 SH3GLB2Q9NR46 395 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 KRT84Q9NSB2 600 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 NRBP2Q9NSY0 501 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 VPS54Q9P1Q0 977 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 NAP1L2Q9ULW6 460 aaPredicted RBP2.84□□□□□ -1.95
PHC3-213ENST00000491258 GINS2Q9Y248 185 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 NME7Q9Y5B8 376 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 MUC6Q6W4X9 2439 aa2.84□□□□□ -1.95
PHC3-213ENST00000491258 TDRD6O60522 2096 aaKnown RBP2.84□□□□□ -1.95
PHC3-213ENST00000491258 ADGRA3Q8IWK6 1321 aa2.84□□□□□ -1.96
PHC3-213ENST00000491258 ANKRD17O75179 2603 aaKnown RBP2.84□□□□□ -1.96
PHC3-213ENST00000491258 SIPA1L1O43166 1804 aa2.84□□□□□ -1.96
PHC3-213ENST00000491258 DDX60LQ5H9U9 1706 aaKnown RBP2.83□□□□□ -1.96
PHC3-213ENST00000491258 LNP1A1A4G5 178 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 LOC730098B7Z3J9 87 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 MBTPS2O43462 519 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 TSPAN1O60635 241 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 TBX10O75333 385 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 SH3BGRLO75368 114 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 CSDE1O75534 798 aaKnown RBP2.83□□□□□ -1.96
PHC3-213ENST00000491258 REC8O95072 547 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 TMOD1P28289 359 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 SFNP31947 248 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 MAN1A1P33908 653 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 DNA2P51530 1060 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 GPC3P51654 580 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 SIRPAP78324 504 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 MYL7Q01449 175 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 PRKCEQ02156 737 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 MAMLD1Q13495 774 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 RUNX3Q13761 415 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 ZNF146Q15072 292 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 PTPN14Q15678 1187 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 UGCGQ16739 394 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 CA9Q16790 459 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 CLLU1OSQ5K130 101 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 ATAD3CQ5T2N8 411 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 GALNT17Q6IS24 598 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 TMEM184AQ6ZMB5 413 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 RUFY3Q7L099 469 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 CATSPER3Q86XQ3 398 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 ECHDC2Q86YB7 292 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 THNSL1Q8IYQ7 743 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 FBXO39Q8N4B4 442 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 MRPL43Q8N983 215 aaKnown RBP2.83□□□□□ -1.96
PHC3-213ENST00000491258 COLGALT1Q8NBJ5 622 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 CCDC148Q8NFR7 591 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 OR52B6Q8NGF0 335 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 OR10G7Q8NGN6 311 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 MRAPQ8TCY5 172 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 TBCKQ8TEA7 893 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 SSMEM1Q8WWF3 244 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 MRPS27Q92552 414 aaKnown RBP2.83□□□□□ -1.96
PHC3-213ENST00000491258 CDCA3Q99618 268 aaPredicted RBP2.83□□□□□ -1.96
PHC3-213ENST00000491258 UPF3BQ9BZI7 483 aaKnown RBP2.83□□□□□ -1.96
PHC3-213ENST00000491258 CWH43Q9H720 699 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 SEPT11Q9NVA2 429 aaKnown RBP2.83□□□□□ -1.96
PHC3-213ENST00000491258 TMEM161AQ9NX61 479 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 BARX2Q9UMQ3 279 aaPredicted RBP2.83□□□□□ -1.96
PHC3-213ENST00000491258 CHD9Q3L8U1 2897 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 DOCK1Q14185 1865 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 COL1A2P08123 1366 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 NID2Q14112 1375 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 EPG5Q9HCE0 2579 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 DCHS1Q96JQ0 3298 aa2.83□□□□□ -1.96
PHC3-213ENST00000491258 DNAH12Q6ZR08 3092 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 A0A1B0GUL6 1792 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 SPEF2Q9C093 1822 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 ZNF236Q9UL36 1845 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 CDH23Q9H251 3354 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 USP24Q9UPU5 2620 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 MYH3P11055 1940 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 USP34Q70CQ2 3546 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 FBN3Q75N90 2809 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 TMEM150BA6NC51 233 aa2.82□□□□□ -1.96
PHC3-213ENST00000491258 HIDE1A8MVS5 230 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms