RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 PTGES3LE9PB15 166 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 BCAS1O75363 584 aaPredicted RBP21.66■■□□□ 1.06
USF3-203ENST00000491165 ZNF806P0C7X5 589 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 HOXB9P17482 250 aaPredicted RBP21.66■■□□□ 1.06
USF3-203ENST00000491165 PCMT1P22061 227 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 HNMTP50135 292 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 PNLIPRP1P54315 467 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 TBPL1P62380 186 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 SPIDRQ14159 915 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 SPCS2Q15005 226 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 CENPSQ8N2Z9 138 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 CHPT1Q8WUD6 406 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 FBLIM1Q8WUP2 373 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 TESCQ96BS2 214 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 MED8Q96G25 268 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 TSSK3Q96PN8 268 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 PARD6AQ9NPB6 346 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 PAK1IP1Q9NWT1 392 aaPredicted RBP21.66■■□□□ 1.06
USF3-203ENST00000491165 SNX6Q9UNH7 406 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 B3GNT3Q9Y2A9 372 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 CORINQ9Y5Q5 1042 aa21.66■■□□□ 1.06
USF3-203ENST00000491165 CDX4O14627 284 aaPredicted RBP21.65■■□□□ 1.06
USF3-203ENST00000491165 IGFBP5P24593 272 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 MAPK1P28482 360 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 PTPN6P29350 595 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 MAGEA2P43356 314 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 FASLGP48023 281 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 IL5RAQ01344 420 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 AQP6Q13520 282 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 PGS1Q32NB8 556 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 GGTA1PQ4G0N0 100 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.65■■□□□ 1.06
USF3-203ENST00000491165 LRRC70Q7Z2Q7 622 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 ANKRD13BQ86YJ7 626 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 ZDHHC21Q8IVQ6 265 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 OR4E2Q8NGC2 313 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 ITFG2Q969R8 447 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 PHOX2BQ99453 314 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 CCDC90BQ9GZT6 254 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 EXD2Q9NVH0 621 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 NLGN3Q9NZ94 848 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 SAMD4AQ9UPU9 718 aaKnown RBP21.65■■□□□ 1.06
USF3-203ENST00000491165 SH2B3Q9UQQ2 575 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 BTBD3Q9Y2F9 522 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 A0A1W2PPV9 198 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 PABPN1LA6NDY0 278 aaKnown RBP21.65■■□□□ 1.06
USF3-203ENST00000491165 IMPDH2P12268 514 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 PSMB5P28074 263 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 RAB28P51157 221 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 MLLT10P55197 1068 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 PHEXP78562 749 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 CDK5R2Q13319 367 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 CPZQ66K79 652 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 SLC9B2Q86UD5 537 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 RBM12BQ8IXT5 1001 aaKnown RBP21.65■■□□□ 1.06
USF3-203ENST00000491165 SETD9Q8NE22 299 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 OR56A3Q8NH54 315 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 SH3GLB1Q9Y371 365 aa21.65■■□□□ 1.06
USF3-203ENST00000491165 LY6G6EA0A0G2JKS1 128 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 ZNF99A8MXY4 864 aaPredicted RBP21.64■■□□□ 1.06
USF3-203ENST00000491165 INMTO95050 263 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 CCNDBP1O95273 360 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 TGM1P22735 817 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 PRPH2P23942 346 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 PEBP1P30086 187 aaKnown RBP21.64■■□□□ 1.06
USF3-203ENST00000491165 PKLRP30613 574 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 CDKN2CP42773 168 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 PSMD7P51665 324 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 GP2P55259 537 aaKnown RBP21.64■■□□□ 1.06
USF3-203ENST00000491165 TSTA3Q13630 321 aaPredicted RBP21.64■■□□□ 1.06
USF3-203ENST00000491165 CYP2A13Q16696 494 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 C14orf28Q4W4Y0 310 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 TCAIMQ8N3R3 496 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 PIK3C3Q8NEB9 887 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 ABHD11Q8NFV4 315 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 OR10Q1Q8NGQ4 319 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 OR4C6Q8NH72 309 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 CNIH3Q8TBE1 160 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 TBC1D20Q96BZ9 403 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 CMTM7Q96FZ5 175 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 GABARAPL1Q9H0R8 117 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 SEMA4GQ9NTN9 838 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 VNN3Q9NY84 501 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 SPHK1Q9NYA1 384 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 PPT2Q9UMR5 302 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 ERGIC3Q9Y282 383 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 U3KQA8 63 aa21.64■■□□□ 1.06
USF3-203ENST00000491165 RFXANKO14593 260 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 SIGLEC6O43699 453 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 UGT2B11O75310 529 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 SULT1C4O75897 302 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 SDC1P18827 310 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 NDUFS1P28331 727 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 RAPSNQ13702 412 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 ATP1A4Q13733 1029 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 RGS21Q2M5E4 152 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 TMED5Q9Y3A6 229 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 PCDHGB1Q9Y5G3 927 aa21.64■■□□□ 1.05
USF3-203ENST00000491165 HEATR5BQ9P2D3 2071 aa21.63■■□□□ 1.05
USF3-203ENST00000491165 KCNE1BA0A087WTH5 132 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms