RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 SH3BGRL2Q9UJC5 107 aa6.83□□□□□ -1.32
PRPF4B-208ENST00000490653 UTP11Q9Y3A2 253 aaKnown RBP6.83□□□□□ -1.32
PRPF4B-208ENST00000490653 C2CD3Q4AC94 2353 aa6.83□□□□□ -1.32
PRPF4B-208ENST00000490653 ANKDD1BA6NHY2 528 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 SAGE2PA6NJ88 616 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 TMEM200CA6NKL6 621 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 SUPT3HB4E1H0 165 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 NPIPA5E9PKD4 350 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 CYR61O00622 381 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 ZNF354AO60765 605 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 SUPT3HO75486 399 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 CLEC3AO75596 197 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 MYO1DO94832 1006 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 WNT11O96014 354 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 SP1P08047 785 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 STSP08842 583 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 GSTA2P09210 222 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 IL10P22301 178 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 RFC3P40938 356 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 MSH2P43246 934 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 PIK3CGP48736 1102 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 LIM2P55344 173 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 RAB38P57729 211 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 ATP6V0D1P61421 351 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 HSF1Q00613 529 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 OC90Q02509 493 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 IRF8Q02556 426 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 SLMAPQ14BN4 828 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 CDSNQ15517 529 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 UAP1Q16222 522 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 EXT1Q16394 746 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 C3AR1Q16581 482 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 ADPRMQ3LIE5 342 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 SP5Q6BEB4 398 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 SLC25A25Q6KCM7 469 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 GFRALQ6UXV0 394 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 DGAT2L6Q6ZPD8 337 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 QSOX2Q6ZRP7 698 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 FGD2Q7Z6J4 655 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 SCUBE1Q8IWY4 988 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 TBC1D19Q8N5T2 526 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 TEX9Q8N6V9 391 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 APCDD1LQ8NCL9 501 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 PDPRQ8NCN5 879 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 ZNF473Q8WTR7 871 aaKnown RBP6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 GAL3ST3Q96A11 431 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 WDR34Q96EX3 536 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 TSPAN17Q96FV3 270 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 SCMH1Q96GD3 660 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 C16orf45Q96MC5 204 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 UTP23Q9BRU9 249 aaKnown RBP6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 FAM129AQ9BZQ8 928 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 RNF32Q9H0A6 362 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 OR51B5Q9H339 312 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 PRTFDC1Q9NRG1 225 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 GPRC5BQ9NZH0 403 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 ABI3Q9P2A4 366 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 TXNDC16Q9P2K2 825 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 ADGRE2Q9UHX3 823 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 NPIPA1Q9UND3 350 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 DCHS2Q6V1P9 2916 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 MTORP42345 2549 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 PCNX1Q96RV3 2341 aa6.82□□□□□ -1.32
PRPF4B-208ENST00000490653 TRGV8A0A0C4DH27 118 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 TRBV11-1A0A0K0K1C0 115 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 ARHGAP10A1A4S6 786 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 PINLYPA6NC86 204 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 URADA6NGE7 173 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 PSMD12O00232 456 aaPredicted RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 LDB3O75112 727 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 PRKRAO75569 313 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 SMNDC1O75940 238 aaKnown RBP eCLIP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 SIX3O95343 332 aaPredicted RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 ETHE1O95571 254 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 CYC1P08574 325 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 LTA4HP09960 611 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 PCNAP12004 261 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 JAK1P23458 1154 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 ATP5A1P25705 553 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 ECHS1P30084 290 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 CASP2P42575 452 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 NEK2P51955 445 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 STXBP1P61764 594 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 CAV1Q03135 178 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 ZRSR2Q15696 482 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 MAPKAPK3Q16644 382 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 PDK4Q16654 411 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 RPS27LQ71UM5 84 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 MDGA2Q7Z553 956 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 SIAH3Q8IW03 269 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 CHERPQ8IWX8 916 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 KRT78Q8N1N4 520 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 MMGT1Q8N4V1 131 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 CPSF7Q8N684 471 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 ACOT4Q8N9L9 421 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 OR2L5Q8NG80 312 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 OR7G3Q8NG95 312 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 DNAJB8Q8NHS0 232 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 SUN3Q8TAQ9 357 aa6.81□□□□□ -1.32
PRPF4B-208ENST00000490653 STAG3L4Q8TBR4 150 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms