RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 UGT2B10P36537 528 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 CDKN1AP38936 164 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 PNLIPRP1P54315 467 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 MTTPP55157 894 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 EIF3BP55884 814 aaKnown RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 LOXL1Q08397 574 aaPredicted RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 TSTA3Q13630 321 aaPredicted RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 SPARCL1Q14515 664 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 GBX1Q14549 363 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 SEMA3AQ14563 771 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 HERC3Q15034 1050 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 SF3B4Q15427 424 aaKnown RBP eCLIP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 DEFB134Q4QY38 66 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 NHSL2Q5HYW2 709 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 FAM120AOSQ5T036 256 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 FDX2Q6P4F2 183 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 MFSD7Q6UXD7 560 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 ZNF534Q76KX8 674 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 ASPGQ86U10 573 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 CAMKVQ8NCB2 501 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 FBXO15Q8NCQ5 510 aaPredicted RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 PPFIBP2Q8ND30 876 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 ZNF740Q8NDX6 193 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 BHLHE22Q8NFJ8 381 aaPredicted RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 OR13J1Q8NGT2 312 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 STYXQ8WUJ0 223 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 SREK1Q8WXA9 508 aaKnown RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 INTS12Q96CB8 462 aaKnown RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 PDLIM2Q96JY6 352 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 ZFP3Q96NJ6 502 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 QRFPRQ96P65 431 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 EBNA1BP2Q99848 306 aaKnown RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 TBL1YQ9BQ87 522 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 MAK16Q9BXY0 300 aaKnown RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 UGT2B28Q9BY64 529 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 LACRTQ9GZZ8 138 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 UBQLN3Q9H347 655 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 PIGMQ9H3S5 423 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 LIMA1Q9UHB6 759 aaKnown RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 FEZ2Q9UHY8 353 aaPredicted RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 PACSIN3Q9UKS6 424 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 BOKQ9UMX3 212 aaPredicted RBP6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 CAMK2AQ9UQM7 478 aa6.47□□□□□ -1.37
PDLIM1-203ENST00000490391 F8W8V4 182 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 TCF21O43680 179 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 OR10H2O60403 315 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 SLC16A8O95907 504 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 HPNP05981 417 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 ALOX12P18054 663 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 CDC25BP30305 580 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 CD79BP40259 229 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 CDKN2BP42772 138 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 KLHL30Q0D2K2 578 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 POU6F1Q14863 301 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 TMED2Q15363 201 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF791Q3KP31 576 aaPredicted RBP6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 ANKRD20A4Q4UJ75 823 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 BEX5Q5H9J7 111 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 ANKRD20A2Q5SQ80 823 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 ANKRD20A1Q5TYW2 823 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 HECTD2Q5U5R9 776 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 ANKRD20A3Q5VUR7 823 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF474Q6S9Z5 364 aaPredicted RBP6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 BZW1Q7L1Q6 419 aaKnown RBP6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 MILR1Q7Z6M3 343 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 SCUBE1Q8IWY4 988 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 GCNT2Q8N0V5 402 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 RFLNBQ8N5W9 214 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 PPHLN1Q8NEY8 458 aaKnown RBP6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 OR10H5Q8NGA6 315 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 ZPLD1Q8TCW7 415 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 MAGEC3Q8TD91 643 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 PAQR8Q8TEZ7 354 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 SKA2Q8WVK7 121 aaPredicted RBP6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 SLC13A3Q8WWT9 602 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 TRMT61AQ96FX7 289 aaKnown RBP6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 ZC3HAV1LQ96H79 300 aaKnown RBP6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 UCN2Q96RP3 112 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 PKP4Q99569 1192 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 CCDC77Q9BR77 488 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 G6PC3Q9BUM1 346 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 TSSK1BQ9BXA7 367 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 C10orf88Q9H8K7 445 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 TMEM184CQ9NVA4 438 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 SH2B3Q9UQQ2 575 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 DTX4Q9Y2E6 619 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 AAR2Q9Y312 384 aaKnown RBP6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 SLC6A5Q9Y345 797 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 PCDHA13Q9Y5I0 950 aa6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 DYNC2H1Q8NCM8 4307 aaKnown RBP6.46□□□□□ -1.38
PDLIM1-203ENST00000490391 A0A1W2PNV4 684 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 FRG2CA6NGY1 282 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 UBFD1O14562 309 aaKnown RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 PRMT5O14744 637 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 CST8O60676 142 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 TRIM3O75382 744 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 PSIP1O75475 530 aaKnown RBP6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 C1QAP02745 245 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 KRT1P04264 644 aa6.45□□□□□ -1.38
PDLIM1-203ENST00000490391 TPM2P07951 284 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms