RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PTCD3Q96EY7 689 aaKnown RBP14.67□□□□□ -0.06
PLOD3-216ENST00000489927 POM121Q96HA1 1249 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 KCNC2Q96PR1 638 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 MAPKAP1Q9BPZ7 522 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 MCMBPQ9BTE3 642 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 CNPPD1Q9BV87 410 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 DERL2Q9GZP9 239 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 RHOJQ9H4E5 214 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 POPDC3Q9HBV1 291 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 LYRM4Q9HD34 91 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 WWOXQ9NZC7 414 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 ACAD8Q9UKU7 415 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 ATG4BQ9Y4P1 393 aa14.67□□□□□ -0.06
PLOD3-216ENST00000489927 WDR1O75083 606 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 PIAS1O75925 651 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 WISP3O95389 354 aaPredicted RBP14.66□□□□□ -0.06
PLOD3-216ENST00000489927 HSPA7P48741 367 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 ARL4CP56559 192 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 ASPHQ12797 758 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 SLC10A1Q14973 349 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 TCAIMQ8N3R3 496 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 SNX31Q8N9S9 440 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 FBXO36Q8NEA4 188 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 MYRIPQ8NFW9 859 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 ZNF721Q8TF20 911 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 ANKRD9Q96BM1 317 aaPredicted RBP14.66□□□□□ -0.06
PLOD3-216ENST00000489927 WDR34Q96EX3 536 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 TMUB1Q9BVT8 246 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 LDAHQ9H6V9 325 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 CNOT10Q9H9A5 744 aaKnown RBP14.66□□□□□ -0.06
PLOD3-216ENST00000489927 CAB39LQ9H9S4 337 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 DNAJB12Q9NXW2 375 aaKnown RBP14.66□□□□□ -0.06
PLOD3-216ENST00000489927 COPS7AQ9UBW8 275 aa14.66□□□□□ -0.06
PLOD3-216ENST00000489927 MAP1AP78559 2803 aaPredicted RBP14.65□□□□□ -0.06
PLOD3-216ENST00000489927 RTCAO00442 366 aaKnown RBP14.65□□□□□ -0.06
PLOD3-216ENST00000489927 TP73O15350 636 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 CTAG2O75638 210 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 STK16O75716 305 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 CD99P14209 185 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 EPORP19235 508 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 ENDOUP21128 410 aaKnown RBP14.65□□□□□ -0.06
PLOD3-216ENST00000489927 ATP5A1P25705 553 aaKnown RBP14.65□□□□□ -0.06
PLOD3-216ENST00000489927 PIGAP37287 484 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 PDIA2Q13087 525 aaKnown RBP14.65□□□□□ -0.06
PLOD3-216ENST00000489927 SNTB1Q13884 538 aaKnown RBP14.65□□□□□ -0.06
PLOD3-216ENST00000489927 OR4D1Q15615 310 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 PDK4Q16654 411 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 MPEG1Q2M385 716 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 C1orf185Q5T7R7 199 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 WLSQ5T9L3 541 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 ADGRD1Q6QNK2 874 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 ARSKQ6UWY0 536 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 SYDE1Q6ZW31 735 aaPredicted RBP14.65□□□□□ -0.06
PLOD3-216ENST00000489927 GPSM1Q86YR5 675 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 KLHL7Q8IXQ5 586 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 ZZZ3Q8IYH5 903 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 ACOT4Q8N9L9 421 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 SARAFQ96BY9 339 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 RUNDC3BQ96NL0 473 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 FOXC2Q99958 501 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 TBCDQ9BTW9 1192 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 EFCAB11Q9BUY7 163 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 MS4A8Q9BY19 250 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 ROGDIQ9GZN7 287 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 CXXC4Q9H2H0 198 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 SH2D2AQ9NP31 389 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 SMYD2Q9NRG4 433 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 ALKBH4Q9NXW9 302 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 SPRR3Q9UBC9 169 aa14.65□□□□□ -0.06
PLOD3-216ENST00000489927 MTO1Q9Y2Z2 717 aaKnown RBP14.65□□□□□ -0.06
PLOD3-216ENST00000489927 VPS13CQ709C8 3753 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 DNAJC13O75165 2243 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 TRGV5A0A0B4J1U4 118 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 PHGDHO43175 533 aaKnown RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 HCN1O60741 890 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 SEC31AO94979 1220 aaKnown RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 RFPL3SP0C7P2 107 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 CCDC166P0CW27 439 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 HIST1H1TP22492 207 aaPredicted RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 MSH2P43246 934 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 SLC12A2P55011 1212 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 DR1Q01658 176 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 POU4F1Q01851 419 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 FOLH1Q04609 750 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 LAPTM5Q13571 262 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 ZNF791Q3KP31 576 aaPredicted RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 SLC25A35Q3KQZ1 300 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 PIGGQ5H8A4 983 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 CDKL4Q5MAI5 379 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 SULT1C3Q6IMI6 304 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 WDR53Q7Z5U6 358 aaPredicted RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 OR4N5Q8IXE1 308 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 C9orf40Q8IXQ3 194 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 SRFBP1Q8NEF9 429 aaKnown RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 ZNF473Q8WTR7 871 aaKnown RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 LIME1Q9H400 295 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 EXO5Q9H790 373 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 ZNF703Q9H7S9 590 aaPredicted RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 CCM2LQ9NUG4 571 aaPredicted RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 NSMCE4AQ9NXX6 385 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms