RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 RBPJQ06330 500 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 IFT88Q13099 833 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 C4orf17Q53FE4 359 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 C10orf62Q5T681 223 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 FRG2Q64ET8 278 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 HSDL2Q6YN16 418 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 GALNTL5Q7Z4T8 443 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 LCA5Q86VQ0 697 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 OR4N5Q8IXE1 308 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 ARMC10Q8N2F6 343 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 EIF1ADQ8N9N8 165 aaKnown RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 PTPMT1Q8WUK0 201 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 ANKRD9Q96BM1 317 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 NSUN5Q96P11 429 aaKnown RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 FRG2BQ96QU4 278 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 HES7Q9BYE0 225 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 OR8D2Q9GZM6 311 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 TRIM45Q9H8W5 580 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 SEMA4BQ9NPR2 832 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 LYARQ9NX58 379 aaKnown RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 FETUBQ9UGM5 382 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 YARS2Q9Y2Z4 477 aaKnown RBP16.62■□□□□ 0.25
ABCF3-217ENST00000489719 COL12A1Q99715 3063 aa16.62■□□□□ 0.25
ABCF3-217ENST00000489719 WIPF3A6NGB9 483 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 C17orf105B2RV13 164 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 PROM1O43490 865 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 ITGA10O75578 1167 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 OTCP00480 354 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 TDGF1P3P51864 188 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 KRTCAP3Q53RY4 240 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 SGO1Q5FBB7 561 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-217ENST00000489719 OR5L2Q8NGL0 311 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 ACMSDQ8TDX5 336 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 DGAT2Q96PD7 388 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 TXLNGYQ9BZA5 131 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 ELOVL6Q9H5J4 265 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 DDX31Q9H8H2 851 aaKnown RBP16.61■□□□□ 0.25
ABCF3-217ENST00000489719 WDR41Q9HAD4 459 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 ZBTB26Q9HCK0 441 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 PSMC3IPQ9P2W1 217 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-217ENST00000489719 PPT2Q9UMR5 302 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 ATG4BQ9Y4P1 393 aa16.61■□□□□ 0.25
ABCF3-217ENST00000489719 A8MT66 165 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 EEDO75530 441 aaKnown RBP16.6■□□□□ 0.25
ABCF3-217ENST00000489719 LDLRP01130 860 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 STSP08842 583 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 FAM58BPP0C7Q3 252 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 BSGP35613 385 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 SSR4P51571 173 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 CDH13P55290 713 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 C18orf63Q68DL7 685 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 TMEM151AQ8N4L1 468 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 OR4F6Q8NGB9 312 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 LIN28AQ9H9Z2 209 aaKnown RBP16.6■□□□□ 0.25
ABCF3-217ENST00000489719 TMEM216Q9P0N5 145 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 COPS7AQ9UBW8 275 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 PLEKHB1Q9UF11 243 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-217ENST00000489719 TBK1Q9UHD2 729 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 DCDC2Q9UHG0 476 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 ZNF223Q9UK11 482 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-217ENST00000489719 ERVK-11Q9UQG0 969 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 KLF13Q9Y2Y9 288 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-217ENST00000489719 ASB4Q9Y574 426 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 LRRK2Q5S007 2527 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 SCN2AQ99250 2005 aa16.6■□□□□ 0.25
ABCF3-217ENST00000489719 ARHGAP10A1A4S6 786 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 KLRC4-KLRK1H3BQV0 150 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 GOLGA8RI6L899 631 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 FGF17O60258 216 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 SUPT7LO94864 414 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 SEMA3DO95025 777 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 ETHE1O95571 254 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 GPR75O95800 540 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 RPS17P08708 135 aaKnown RBP16.59■□□□□ 0.25
ABCF3-217ENST00000489719 SBK3P0C264 359 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 HSD17B3P37058 310 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 STT3AP46977 705 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 HNRNPH2P55795 449 aaKnown RBP16.59■□□□□ 0.25
ABCF3-217ENST00000489719 HERVK_113P63132 956 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 TNFRSF17Q02223 184 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 FOLH1Q04609 750 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 TRAF3Q13114 568 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.59■□□□□ 0.25
ABCF3-217ENST00000489719 MRM1Q6IN84 353 aaKnown RBP16.59■□□□□ 0.25
ABCF3-217ENST00000489719 RPS27LQ71UM5 84 aaKnown RBP16.59■□□□□ 0.25
ABCF3-217ENST00000489719 PAGE2Q7Z2X7 111 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 NUDT13Q86X67 352 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 CYP4Z2PQ8N1L4 340 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 LRRN4CLQ8ND94 238 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 MYRIPQ8NFW9 859 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 SLC2A12Q8TD20 617 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 TRPC4APQ8TEL6 797 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 ZNF483Q8TF39 744 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-217ENST00000489719 UBLCP1Q8WVY7 318 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-217ENST00000489719 ASB15Q8WXK1 588 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 PPWD1Q96BP3 646 aaKnown RBP16.59■□□□□ 0.25
ABCF3-217ENST00000489719 SENP5Q96HI0 755 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-217ENST00000489719 ERVK-6Q9BXR3 956 aa16.59■□□□□ 0.25
ABCF3-217ENST00000489719 TIMMDC1Q9NPL8 285 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms