RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 HLCSP50747 726 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 TDGF1P3P51864 188 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 TNFRSF17Q02223 184 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 IFT88Q13099 833 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 TRAF3Q13114 568 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.72■□□□□ 0.43
MRPL55-230ENST00000489430 MRM1Q6IN84 353 aaKnown RBP17.72■□□□□ 0.43
MRPL55-230ENST00000489430 MILR1Q7Z6M3 343 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 NUDT13Q86X67 352 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 SLC22A9Q8IVM8 553 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 FAM98AQ8NCA5 519 aaKnown RBP17.72■□□□□ 0.43
MRPL55-230ENST00000489430 NCLNQ969V3 563 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 ANKRD9Q96BM1 317 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-230ENST00000489430 SIGLEC12Q96PQ1 595 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 AHSPQ9NZD4 102 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 DCDC2Q9UHG0 476 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 ADAM29Q9UKF5 820 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 PROM1O43490 865 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 DYRK3O43781 588 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 SP1P08047 785 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 COX7A2P14406 83 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 ATP5F1P24539 256 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-230ENST00000489430 TTC19Q6DKK2 380 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-230ENST00000489430 SPINK14Q6IE38 97 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 SLC25A25Q6KCM7 469 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 HSDL2Q6YN16 418 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 CLNKQ7Z7G1 428 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 TDRPQ86YL5 185 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 GPALPP1Q8IXQ4 340 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 MZB1Q8WU39 189 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 PTPMT1Q8WUK0 201 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-230ENST00000489430 TMEM125Q96AQ2 219 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 NSUN5Q96P11 429 aaKnown RBP17.71■□□□□ 0.43
MRPL55-230ENST00000489430 CDK15Q96Q40 435 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 PELOQ9BRX2 385 aaKnown RBP17.71■□□□□ 0.43
MRPL55-230ENST00000489430 ELOVL6Q9H5J4 265 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 SEMA4BQ9NPR2 832 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-230ENST00000489430 TMEM216Q9P0N5 145 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 FBXW2Q9UKT8 454 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 SNX6Q9UNH7 406 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 STK38LQ9Y2H1 464 aa17.71■□□□□ 0.43
MRPL55-230ENST00000489430 YARS2Q9Y2Z4 477 aaKnown RBP17.71■□□□□ 0.43
MRPL55-230ENST00000489430 USP9YO00507 2555 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-230ENST00000489430 LDB3O75112 727 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 SH3BGRLO75368 114 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 SLC25A12O75746 678 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 STSP08842 583 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 STT3AP46977 705 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 NEK2P51955 445 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 NAA20P61599 178 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 TEX35Q5T0J7 233 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 CYP20A1Q6UW02 462 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 PAGE2Q7Z2X7 111 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 RNF175Q8N4F7 328 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 LRRN4CLQ8ND94 238 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 OR4F6Q8NGB9 312 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 OR5L2Q8NGL0 311 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 CCDC126Q96EE4 140 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 RBM18Q96H35 190 aaKnown RBP17.7■□□□□ 0.42
MRPL55-230ENST00000489430 WDR41Q9HAD4 459 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 BRF2Q9HAW0 419 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 NMRK1Q9NWW6 199 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 ANKRD10Q9NXR5 420 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 TRPS1Q9UHF7 1281 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 ZNF223Q9UK11 482 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-230ENST00000489430 ATG4BQ9Y4P1 393 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 ASB4Q9Y574 426 aa17.7■□□□□ 0.42
MRPL55-230ENST00000489430 C17orf105B2RV13 164 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 NME2P1O60361 137 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 ETHE1O95571 254 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 FAM58BPP0C7Q3 252 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 GP1BBP13224 206 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 TNNI3P19429 210 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 IMPDH1P20839 514 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 NME2P22392 152 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 GALNSP34059 522 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 HSD17B3P37058 310 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 PRKAA2P54646 552 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 PLIN5Q00G26 463 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 CLCQ05315 142 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 C4orf17Q53FE4 359 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 KRTCAP3Q53RY4 240 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 ZNF678Q5SXM1 525 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 POGLUT1Q8NBL1 392 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 TRPC4APQ8TEL6 797 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 THAP3Q8WTV1 239 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-230ENST00000489430 ART5Q96L15 291 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 ZNF382Q96SR6 550 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 SORBS1Q9BX66 1292 aaKnown RBP17.69■□□□□ 0.42
MRPL55-230ENST00000489430 MYOTQ9UBF9 498 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 COPS7AQ9UBW8 275 aa17.69■□□□□ 0.42
MRPL55-230ENST00000489430 ERRFI1Q9UJM3 462 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-230ENST00000489430 A0A1B0GUH1 482 aa17.68■□□□□ 0.42
MRPL55-230ENST00000489430 FGF17O60258 216 aa17.68■□□□□ 0.42
MRPL55-230ENST00000489430 DLX3O60479 287 aa17.68■□□□□ 0.42
MRPL55-230ENST00000489430 EEDO75530 441 aaKnown RBP17.68■□□□□ 0.42
MRPL55-230ENST00000489430 ITGA10O75578 1167 aa17.68■□□□□ 0.42
MRPL55-230ENST00000489430 GPR75O95800 540 aa17.68■□□□□ 0.42
MRPL55-230ENST00000489430 NR2F6P10588 404 aa17.68■□□□□ 0.42
MRPL55-230ENST00000489430 PYGBP11216 843 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms