RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 SLC44A2Q8IWA5 706 aaPredicted RBP11.25□□□□□ -0.61
SMTN-218ENST00000489337 OR8H3Q8N146 312 aa11.25□□□□□ -0.61
SMTN-218ENST00000489337 CCM2Q9BSQ5 444 aa11.25□□□□□ -0.61
SMTN-218ENST00000489337 ELOVL6Q9H5J4 265 aa11.25□□□□□ -0.61
SMTN-218ENST00000489337 DEC1Q9P2X7 70 aa11.25□□□□□ -0.61
SMTN-218ENST00000489337 TSPAN12O95859 305 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 BCKDHAP12694 445 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 EPB42P16452 691 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 RPS3P23396 243 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMTN-218ENST00000489337 AQP1P29972 269 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMTN-218ENST00000489337 EIF4HQ15056 248 aaKnown RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 KLHL17Q6TDP4 642 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 EIF3MQ7L2H7 374 aaKnown RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 ATCAYQ86WG3 371 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 RGL4Q8IZJ4 473 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 FAM9CQ8IZT9 166 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 DEFB119Q8N690 84 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 LILRA3Q8N6C8 439 aaPredicted RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 GALNT6Q8NCL4 622 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 NLGN4YQ8NFZ3 816 aaPredicted RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 VN1R2Q8NFZ6 395 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 OR2AP1Q8NGE2 309 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 C9orf43Q8TAL5 461 aaPredicted RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 DPH2Q9BQC3 489 aaPredicted RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 B3GNT2Q9NY97 397 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 NDRG2Q9UN36 371 aaKnown RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 ALG5Q9Y673 324 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 PRRC2CQ9Y520 2896 aaKnown RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 CACNA1IQ9P0X4 2223 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 TSPAN4O14817 238 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 LILRB3O75022 631 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 MOSPD3O75425 235 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 HIST1H2AGP0C0S8 130 aaPredicted RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 HIST1H2ADP20671 130 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 ALAS2P22557 587 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 DGKAP23743 735 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 HLA-DMAP28067 261 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 SOX3P41225 446 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 ITGA1P56199 1179 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 HTRA4P83105 476 aaPredicted RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 CPSF6Q16630 551 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMTN-218ENST00000489337 VMACQ2NL98 169 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 SAXO2Q658L1 398 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 ZNF551Q7Z340 670 aaPredicted RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 TEX26Q8N6G2 289 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 FGF14Q92915 247 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 TRMT61AQ96FX7 289 aaKnown RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 MSANTD3Q96H12 275 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 HIST1H2AHQ96KK5 128 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 NRTNQ99748 197 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 HIST1H2AJQ99878 128 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 H2AFJQ9BTM1 129 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 GABARAPL3Q9BY60 117 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 NSUN3Q9H649 340 aaKnown RBP11.24□□□□□ -0.61
SMTN-218ENST00000489337 BRD9Q9H8M2 597 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 MCUBQ9NWR8 336 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 PCDHGB3Q9Y5G1 929 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 CACNA1HO95180 2353 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 ASXL3Q9C0F0 2248 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 DOCK4Q8N1I0 1966 aa11.24□□□□□ -0.61
SMTN-218ENST00000489337 PTPRDP23468 1912 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 FFAR2O15552 330 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 LZTS3O60299 673 aaPredicted RBP11.23□□□□□ -0.61
SMTN-218ENST00000489337 SLC25A14O95258 325 aaPredicted RBP11.23□□□□□ -0.61
SMTN-218ENST00000489337 LINC00271P0C7V0 271 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 CPN2P22792 545 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 PSMA1P25786 263 aaKnown RBP11.23□□□□□ -0.61
SMTN-218ENST00000489337 RPS14P62263 151 aaKnown RBP11.23□□□□□ -0.61
SMTN-218ENST00000489337 SNRPD1P62314 119 aaKnown RBP11.23□□□□□ -0.61
SMTN-218ENST00000489337 SSX1Q16384 188 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 MLIPQ5VWP3 458 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 C22orf39Q6P5X5 142 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 PARM1Q6UWI2 310 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 ANGPTL8Q6UXH0 198 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 GLCCI1Q86VQ1 547 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 NPAS3Q8IXF0 933 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 PLPP6Q8IY26 295 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 C19orf18Q8NEA5 215 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 SPPL2AQ8TCT8 520 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 KCNJ9Q92806 393 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 CLP1Q92989 425 aaKnown RBP11.23□□□□□ -0.61
SMTN-218ENST00000489337 ATG10Q9H0Y0 220 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 SERHLQ9NQF3 203 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 CCL27Q9Y4X3 112 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 FAM240BA0A1B0GVZ2 78 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 A8MUA0 341 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 C1QCP02747 245 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 ADH5P11766 374 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 POU2F1P14859 743 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 GPC1P35052 558 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 ABRQ12979 859 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 MAB21L1Q13394 359 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 TIGD3Q6B0B8 471 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 ZNF621Q6ZSS3 439 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 LIX1LQ8IVB5 337 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 SLC5A8Q8N695 610 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 SELENOMQ8WWX9 145 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 C1QTNF7Q9BXJ2 289 aa11.23□□□□□ -0.61
SMTN-218ENST00000489337 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.23□□□□□ -0.618e-8■■■□□ 14.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms