RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GCAP28676 217 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 SERPINB1P30740 379 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 TRHRP34981 398 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-206ENST00000489142 PIK3CBP42338 1070 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 PER3P56645 1201 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 GPR85P60893 370 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 ZRSR2Q15696 482 aaKnown RBP13.04□□□□□ -0.32
VTI1A-206ENST00000489142 FAM153CQ494X1 144 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 DGAT2L6Q6ZPD8 337 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 MDGA2Q7Z553 956 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 TMEM132CQ8N3T6 1108 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 TMEM156Q8N614 296 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 SLC2A12Q8TD20 617 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 UCN3Q969E3 161 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 ATP6V1E2Q96A05 226 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 PPWD1Q96BP3 646 aaKnown RBP13.04□□□□□ -0.32
VTI1A-206ENST00000489142 CCDC77Q9BR77 488 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 ZNF717Q9BY31 904 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-206ENST00000489142 SEMA4BQ9NPR2 832 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-206ENST00000489142 VTI1BQ9UEU0 232 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 TINAGQ9UJW2 476 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 PCTPQ9UKL6 214 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 PPIEQ9UNP9 301 aaKnown RBP13.04□□□□□ -0.32
VTI1A-206ENST00000489142 ATG4BQ9Y4P1 393 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 PCDHGA11Q9Y5H2 935 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 TNPO3Q9Y5L0 923 aaKnown RBP13.04□□□□□ -0.32
VTI1A-206ENST00000489142 SPACA6W5XKT8 324 aa13.04□□□□□ -0.32
VTI1A-206ENST00000489142 A0A1B0GTL3 188 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 A0A1B0GUH1 482 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 CCDC189A1A4V9 331 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 GLOD5A6NK44 160 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 H0YIV9 168 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 HRKO00198 91 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 CCL21O00585 134 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 TMPRSS11DO60235 418 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 SMIM24O75264 130 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 ZFAND5O76080 213 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 OR6B1O95007 311 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 RBP1P09455 135 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 DCTP40126 519 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 MEOX1P50221 254 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 CCNG1P51959 295 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 PHEXP78562 749 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 TNFRSF17Q02223 184 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 C3AR1Q16581 482 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 SGO1Q5FBB7 561 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 TEX35Q5T0J7 233 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 GPR180Q86V85 440 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 SIAH3Q8IW03 269 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 SULF2Q8IWU5 870 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 ARMC10Q8N2F6 343 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 CEP112Q8N8E3 955 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 L3MBTL4Q8NA19 623 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 FAM98AQ8NCA5 519 aaKnown RBP13.03□□□□□ -0.32
VTI1A-206ENST00000489142 OR14A16Q8NHC5 309 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 WDR20Q8TBZ3 569 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 DAZLQ92904 295 aaKnown RBP13.03□□□□□ -0.32
VTI1A-206ENST00000489142 TMEM125Q96AQ2 219 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 REPS1Q96D71 796 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 GPR137Q96N19 417 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 RPF2Q9H7B2 306 aaKnown RBP13.03□□□□□ -0.32
VTI1A-206ENST00000489142 ZBTB26Q9HCK0 441 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 ADGRE2Q9UHX3 823 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 ZNF180Q9UJW8 692 aa13.03□□□□□ -0.32
VTI1A-206ENST00000489142 UNC79Q9P2D8 2635 aa13.02□□□□□ -0.32
VTI1A-206ENST00000489142 A0A0A6YYD5 115 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 A0A0G2JMM0 328 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 A0A1W2PPB8 328 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 A0A1W2PRS3 328 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 KIR3DP1A8MWS1 328 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 G3V3Y1 287 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 PPP6CO00743 305 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 UGDHO60701 494 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 SLC19A2O60779 497 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 CLDN9O95484 217 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 SBK3P0C264 359 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF24P17028 368 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 PTX3P26022 381 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-206ENST00000489142 PTGER1P34995 402 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 BSGP35613 385 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 SOX3P41225 446 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 CA7P43166 264 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 SSR4P51571 173 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 HK2P52789 917 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 FOLH1Q04609 750 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 GTF3C1Q12789 2109 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 TRAF3Q13114 568 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 SERTAD2Q14140 314 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 TSNAXIP1Q2TAA8 658 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 IL20RBQ6UXL0 311 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 HSDL2Q6YN16 418 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 NCCRP1Q6ZVX7 275 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-206ENST00000489142 IFT20Q8IY31 132 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 ZCCHC7Q8N3Z6 543 aaKnown RBP13.02□□□□□ -0.33
VTI1A-206ENST00000489142 MORN4Q8NDC4 146 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 ASB15Q8WXK1 588 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 RELTQ969Z4 430 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 CCDC120Q96HB5 630 aa13.02□□□□□ -0.33
VTI1A-206ENST00000489142 MAGED4Q96JG8 741 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms