RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TUBA3EQ6PEY2 450 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 GRHL3Q8TE85 626 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 CAVIN3Q969G5 261 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 TAAR6Q96RI8 345 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 PARD6BQ9BYG5 372 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.88□□□□□ -0.031e-14■■□□□ 13
CTDSP1-209ENST00000488627 GSTO2Q9H4Y5 243 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 RPF2Q9H7B2 306 aaKnown RBP14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 TRPS1Q9UHF7 1281 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 GRID1Q9ULK0 1009 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 SPACA6W5XKT8 324 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 SHANK1Q9Y566 2161 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 RP1L1Q8IWN7 2480 aaPredicted RBP14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 SYNDIG1LA6NDD5 238 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 TMEM200CA6NKL6 621 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 PRKRAO75569 313 aaKnown RBP14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 PDYNP01213 254 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 GBAP04062 536 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 UQCRHP07919 91 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 FAM58BPP0C7Q3 252 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 TNFRSF17Q02223 184 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 STX4Q12846 297 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 MRPL49Q13405 166 aaKnown RBP14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 SERTAD2Q14140 314 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 TCHHL1Q5QJ38 904 aaPredicted RBP14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 ZNF324BQ6AW86 544 aaPredicted RBP14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 ZNF227Q86WZ6 799 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 OR4N5Q8IXE1 308 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 METTL4Q8N3J2 472 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 TMEM132CQ8N3T6 1108 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 CDYL2Q8N8U2 506 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 MDS2Q8NDY4 140 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 FAR1Q8WVX9 515 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 TANKQ92844 425 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 UCN3Q969E3 161 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 NCLNQ969V3 563 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 SIGLEC12Q96PQ1 595 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 MRPL1Q9BYD6 325 aaKnown RBP14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 ELOVL6Q9H5J4 265 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 TRIM45Q9H8W5 580 aaPredicted RBP14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 BRF2Q9HAW0 419 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 LYARQ9NX58 379 aaKnown RBP14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 MAP10Q9P2G4 905 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 PHF11Q9UIL8 331 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 SNX6Q9UNH7 406 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 SCN2AQ99250 2005 aa14.87□□□□□ -0.03
CTDSP1-209ENST00000488627 TRBV11-1A0A0K0K1C0 115 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 TLDC2A0PJX2 215 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 GABRR3A8MPY1 467 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 MANBAO00462 879 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 CDK2AP1O14519 115 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 UBFD1O14562 309 aaKnown RBP14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 PRKNO60260 465 aaPredicted RBP14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 PRAMEF2O60811 474 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 MLYCDO95822 493 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 DDAH2O95865 285 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 IFNA16P05015 189 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 MYL2P10916 166 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 TPP2P29144 1249 aaPredicted RBP14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 CLCN2P51788 898 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 GALNT1Q10472 559 aaPredicted RBP14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 TBL3Q12788 808 aaKnown RBP14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 CCDC153Q494R4 210 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 SPINK14Q6IE38 97 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 GPRIN3Q6ZVF9 776 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 NUDT13Q86X67 352 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 C4orf33Q8N1A6 199 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 ZNF321PQ8N8H1 164 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 MORN4Q8NDC4 146 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 SELENOMQ8WWX9 145 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 DAZLQ92904 295 aaKnown RBP14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 CCDC126Q96EE4 140 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 VMP1Q96GC9 406 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 HBEGFQ99075 208 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 DEFB126Q9BYW3 111 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 ANKRD10Q9NXR5 420 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 LGALS13Q9UHV8 139 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 ADAM29Q9UKF5 820 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 PCDHGB6Q9Y5F9 930 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 CLCA3PQ9Y6N3 262 aa14.86□□□□□ -0.03
CTDSP1-209ENST00000488627 GLOD5A6NK44 160 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 COPEO14579 308 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 NEURL1O76050 574 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 AIFM1O95831 613 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 KLK1P06870 262 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 CHN1P15882 459 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 TLX1P31314 330 aaPredicted RBP14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 TRHRP34981 398 aaPredicted RBP14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 NAGLUP54802 743 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 PKNOX1P55347 436 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 DNAJB13P59910 316 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 FOLH1Q04609 750 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 LCP2Q13094 533 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 NR6A1Q15406 480 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 OR1C1Q15619 314 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 CYP20A1Q6UW02 462 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 DGAT2L6Q6ZPD8 337 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 TRABD2AQ86V40 505 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 RIBC1Q8N443 379 aaPredicted RBP14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 MREGQ8N565 214 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms