RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ENPP2Q13822 863 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 MS4A18Q3C1V0 323 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 HERC4Q5GLZ8 1057 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 CYB5D1Q6P9G0 228 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 ZFAND4Q86XD8 727 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 CCAR2Q8N163 923 aaKnown RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 CCDC185Q8N715 623 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 TCEANCQ8N8B7 351 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 OR10G7Q8NGN6 311 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 OR2L2Q8NH16 312 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 SPATA18Q8TC71 538 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 LRRC15Q8TF66 581 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 NPRL2Q8WTW4 380 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 RASL10AQ92737 203 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 P2RX5Q93086 422 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 ERP27Q96DN0 273 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 OMA1Q96E52 524 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 SIPA1Q96FS4 1042 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 KLHL5Q96PQ7 755 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 PKP2Q99959 881 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 CCDC3Q9BQI4 270 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 MGME1Q9BQP7 344 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 INPP5KQ9BT40 448 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 UBE2ZQ9H832 354 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 RPF1Q9H9Y2 349 aaKnown RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 FBXL4Q9UKA2 621 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 COLEC10Q9Y6Z7 277 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 SHROOM3Q8TF72 1996 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 COL11A1P12107 1806 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-214ENST00000488427 PDHXO00330 501 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 MYOGP15173 224 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 PDHA2P29803 388 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 SOX3P41225 446 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 CLDN17P56750 224 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 CALCOCO2Q13137 446 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 NFATC2Q13469 925 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 PPA1Q15181 289 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 EXT1Q16394 746 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 LPAL2Q16609 132 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 CDO1Q16878 200 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 FAM182AQ5T1J6 154 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 SHEQ5VZ18 495 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 PAQR6Q6TCH4 344 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 PET117Q6UWS5 81 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 Q6ZRP5 223 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 CDHR3Q6ZTQ4 885 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 GPR141Q7Z602 305 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 THNSL1Q8IYQ7 743 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 TTC5Q8N0Z6 440 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 RADILQ96JH8 1075 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 GDAP1L1Q96MZ0 367 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 SERINC2Q96SA4 455 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 PARK7Q99497 189 aaKnown RBP3.63□□□□□ -1.83
ITGB1-214ENST00000488427 TEX13AQ9BXU3 409 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-214ENST00000488427 EDEM3Q9BZQ6 932 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 TRIM7Q9C029 511 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 TRIM6Q9C030 488 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-214ENST00000488427 RAVER2Q9HCJ3 691 aaKnown RBP3.63□□□□□ -1.83
ITGB1-214ENST00000488427 NLGN3Q9NZ94 848 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 C5AR2Q9P296 337 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 AGTPBP1Q9UPW5 1226 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 SIPA1L3O60292 1781 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-214ENST00000488427 MYO10Q9HD67 2058 aa3.63□□□□□ -1.83
ITGB1-214ENST00000488427 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-214ENST00000488427 KRTAP16-1A8MUX0 517 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 A8MVM7 634 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 NPIPA3F8WFD2 350 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 H7C0S8 307 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 SOCS3O14543 225 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 PROS1P07225 676 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 PDGFRAP16234 1089 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 CD27P26842 260 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 SOAT1P35610 550 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 CDX1P47902 265 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-214ENST00000488427 SCN1BQ07699 218 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 ZNF177Q13360 481 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-214ENST00000488427 VGLL4Q14135 290 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 GLIPR1L2Q4G1C9 344 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 C3P1Q6ZMU1 363 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 IL17RELQ6ZVW7 336 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 ANKRD23Q86SG2 305 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 PRUNE1Q86TP1 453 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 METTL23Q86XA0 190 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 CATSPERDQ86XM0 798 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 RAD54LQ92698 747 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 TAF15Q92804 592 aaKnown RBP eCLIP3.62□□□□□ -1.83
ITGB1-214ENST00000488427 FAM162AQ96A26 154 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 SPATA17Q96L03 361 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 FER1L6-AS2Q96M78 137 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 OVOL2Q9BRP0 275 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 KATNB1Q9BVA0 655 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 EGLN3Q9H6Z9 239 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 SLC7A10Q9NS82 523 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 POLKQ9UBT6 870 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 PILRBQ9UKJ0 227 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 ANGPTL2Q9UKU9 493 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 RUVBL2Q9Y230 463 aaKnown RBP3.62□□□□□ -1.83
ITGB1-214ENST00000488427 SIP14410 1827 aa3.62□□□□□ -1.83
ITGB1-214ENST00000488427 RPAP1Q9BWH6 1393 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms