RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CADM4Q8NFZ8 388 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 FCGR1BQ92637 280 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 IER2Q9BTL4 223 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 REXO4Q9GZR2 422 aaKnown RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 OR52A5Q9H2C5 316 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 EHD3Q9NZN3 535 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 BOLA1Q9Y3E2 137 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 PEX16Q9Y5Y5 336 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 ANKRD12Q6UB98 2062 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 ABCA7Q8IZY2 2146 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 RASGRP1O95267 797 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 GSTM1P09488 218 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 HIST1H2AGP0C0S8 130 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 TRAPPC2P0DI81 140 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 TRAPPC2BP0DI82 140 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 HIST1H2ADP20671 130 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 KELP23276 732 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 CD27P26842 260 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 AK4P27144 223 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 HSPA7P48741 367 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 CLCNKAP51800 687 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 SRP54P61011 504 aaKnown RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 CSTF1Q05048 431 aaKnown RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 ALG11Q2TAA5 492 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 NXNL2Q5VZ03 156 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 ANKS6Q68DC2 871 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 MAMSTRQ6ZN01 415 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 RGL4Q8IZJ4 473 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 PSD4Q8NDX1 1056 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 JPH3Q8WXH2 748 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 SCARF2Q96GP6 870 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 HIST1H2AHQ96KK5 128 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 FOPNLQ96NB1 174 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 SDHCQ99643 169 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 HIST1H2AJQ99878 128 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 H2AFJQ9BTM1 129 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 NUAK2Q9H093 628 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 TMEM168Q9H0V1 697 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 IRF2BPLQ9H1B7 796 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 TCEAL2Q9H3H9 227 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 ZNF225Q9UK10 706 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 SNX6Q9UNH7 406 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 RNF6Q9Y252 685 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 PRELID1Q9Y255 219 aa13.08□□□□□ -0.32
COPS7B-221ENST00000488111 DNMT3AQ9Y6K1 912 aaPredicted RBP13.08□□□□□ -0.32
COPS7B-221ENST00000488111 FAM25AB3EWG3 89 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 FAM25CB3EWG5 89 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 FAM25GB3EWG6 89 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 LOC110117498-PIK3R3F6TDL0 507 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 M0R082 166 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 CXCR6O00574 342 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 PSIP1O75475 530 aaKnown RBP13.07□□□□□ -0.32
COPS7B-221ENST00000488111 WNT1P04628 370 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 IL1RNP18510 177 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 CYP2A7P20853 494 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 PRDX3P30048 256 aaKnown RBP13.07□□□□□ -0.32
COPS7B-221ENST00000488111 RRM2P31350 389 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 KRT20P35900 424 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 CTSKP43235 329 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 SIM2Q14190 667 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-221ENST00000488111 SMN1Q16637 294 aaKnown RBP13.07□□□□□ -0.32
COPS7B-221ENST00000488111 ZXDCQ2QGD7 858 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-221ENST00000488111 SCIMPQ6UWF3 145 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 GALNT5Q7Z7M9 940 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 C1orf210Q8IVY1 113 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 MAML2Q8IZL2 1156 aaPredicted RBP13.07□□□□□ -0.32
COPS7B-221ENST00000488111 LMNTD1Q8N9Z9 388 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 FNDC5Q8NAU1 212 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 PIK3R3Q92569 461 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 FAM162AQ96A26 154 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 TBC1D20Q96BZ9 403 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 KLHDC7BQ96G42 594 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 OR2M4Q96R27 311 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 APOL4Q9BPW4 351 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 CCDC32Q9BV29 185 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 C1QTNF3Q9BXJ4 246 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 ZDHHC5Q9C0B5 715 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 DPEP2Q9H4A9 486 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 RIBC2Q9H4K1 309 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 ACTL8Q9H568 366 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 PLSCR3Q9NRY6 295 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 DCAF13Q9NV06 445 aaKnown RBP13.07□□□□□ -0.32
COPS7B-221ENST00000488111 VNN3Q9NY84 501 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 WWOXQ9NZC7 414 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 KLF15Q9UIH9 416 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 GMPPBQ9Y5P6 360 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 PNMA8CA0A1B0GUJ8 204 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 AP3D1O14617 1153 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 DFNA5O60443 496 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 RETP07949 1114 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 ANXA5P08758 320 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 UBL4AP11441 157 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 HOXB6P17509 224 aaKnown RBP13.07□□□□□ -0.32
COPS7B-221ENST00000488111 GADD45AP24522 165 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 ACADLP28330 430 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 IFNA8P32881 189 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 SYT16Q17RD7 645 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 SLC36A4Q6YBV0 504 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 CCDC190Q86UF4 302 aa13.07□□□□□ -0.32
COPS7B-221ENST00000488111 SLC38A6Q8IZM9 456 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms