RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 NME3Q13232 169 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 KRT81Q14533 505 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 DUOXA1Q1HG43 343 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 POM121L1PQ3SYA9 428 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 GPR33Q49SQ1 333 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 Q4G0T1 1027 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 ZNF311Q5JNZ3 666 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 ARMC12Q5T9G4 340 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 HIST2H2AA3Q6FI13 130 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 ZSCAN25Q6NSZ9 544 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 COX8CQ7Z4L0 72 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 PIP4P1Q86T03 277 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SLC22A16Q86VW1 577 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 CBWD2Q8IUF1 395 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SPATA22Q8NHS9 363 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 MIPOL1Q8TD10 442 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 GIPC3Q8TF64 312 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 TMEM255BQ8WV15 326 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 STARD8Q92502 1023 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 P3H4Q92791 437 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 RPL3LQ92901 407 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 COQ8BQ96D53 544 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 BPIFA2Q96DR5 249 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 URB1-AS1Q96HZ7 61 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 AGAP3Q96P47 875 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 AGPAT1Q99943 283 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 TMEM43Q9BTV4 400 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 MMTAG2Q9BU76 263 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 MIS12Q9H081 205 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SLC26A1Q9H2B4 701 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SLC38A7Q9NVC3 462 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 OR6C2Q9NZP2 312 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 LHX3Q9UBR4 397 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 BCAP29Q9UHQ4 241 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SLC12A6Q9UHW9 1150 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 DIMT1Q9UNQ2 313 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 OR1A2Q9Y585 309 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 PCDHAC2Q9Y5I4 1007 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 KIF7Q2M1P5 1343 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 OR2AG2A6NM03 316 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SOCS2O14508 198 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 ARPC3O15145 178 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 MID1O15344 667 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 LRRTM2O43300 516 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SMAD6O43541 496 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 OR1F1O43749 312 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SLC28A2O43868 658 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 BCAS1O75363 584 aaPredicted RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 RFPL2O75678 378 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 HPRP00739 348 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 CHRNA1P02708 482 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 CSF2P04141 144 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SERPINF2P08697 491 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 HIST1H2AGP0C0S8 130 aaPredicted RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 TMEM191BP0C7N4 346 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 PABPC4LP0CB38 370 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 FAM106CPP0CH98 169 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 STAG3L3P0CL85 134 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 CCDC130P13994 396 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 DARSP14868 501 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 CPN1P15169 458 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 GM2AP17900 193 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 TPSB2P20231 275 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 AXLP30530 894 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 CYLC1P35663 651 aaPredicted RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 GRIA1P42261 906 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 NPY2RP49146 381 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 GABPAQ06546 454 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SRSF1Q07955 248 aaKnown RBP eCLIP3.24□□□□□ -1.89
HFM1-208ENST00000488023 MTX1Q13505 466 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 EXOSC2Q13868 293 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 CEACAM7Q14002 265 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 OPCMLQ14982 345 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 TPSAB1Q15661 275 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 TWIST1Q15672 202 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 CLPPQ16740 277 aaPredicted RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 LYPLAL1Q5VWZ2 237 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 AWAT2Q6E213 333 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SNRNP48Q6IEG0 339 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 CDC42EP5Q6NZY7 148 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 TMEM64Q6YI46 380 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 ZNF841Q6ZN19 808 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 CDR2LQ86X02 465 aaPredicted RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 WDR49Q8IV35 697 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 VSTM4Q8IW00 320 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 RNF113BQ8IZP6 322 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 LRRC43Q8N309 656 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 PRSS35Q8N3Z0 413 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 NANOGP1Q8N7R0 232 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 TMEM99Q8N816 258 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 ANKFN1Q8N957 763 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 RNF149Q8NC42 400 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 SMRP1Q8NCR6 262 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 OR4C15Q8NGM1 316 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 OR6M1Q8NGM8 313 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 RAB3IL1Q8TBN0 382 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 GRHL3Q8TE85 626 aa3.24□□□□□ -1.89
HFM1-208ENST00000488023 EMG1Q92979 244 aaKnown RBP3.24□□□□□ -1.89
HFM1-208ENST00000488023 HIST1H2ACQ93077 130 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms