RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 FHITP49789 147 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 ABRQ12979 859 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 CAMK2DQ13557 499 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 HYAL4Q2M3T9 481 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 CFAP58Q5T655 872 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 WDR25Q64LD2 544 aaPredicted RBP2.61□□□□□ -1.99
SMC4-219ENST00000487747 CCAR2Q8N163 923 aaKnown RBP2.61□□□□□ -1.99
SMC4-219ENST00000487747 SMYD1Q8NB12 490 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 BEST4Q8NFU0 473 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 AFAP1L1Q8TED9 768 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 RBM18Q96H35 190 aaKnown RBP2.61□□□□□ -1.99
SMC4-219ENST00000487747 S100A14Q9HCY8 104 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 AMBNQ9NP70 447 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 SNX7Q9UNH6 387 aa2.61□□□□□ -1.99
SMC4-219ENST00000487747 FAM231BA6NCW3 169 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 TCP11X1B4DZS4 312 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 UBE2CO00762 179 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 DUSP11O75319 330 aaKnown RBP2.6□□□□□ -1.99
SMC4-219ENST00000487747 GGPS1O95749 300 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 SLC35E2P0CK97 266 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 KRT3P12035 628 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 PPP2R1AP30153 589 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 PRPF4BQ13523 1007 aaKnown RBP2.6□□□□□ -1.99
SMC4-219ENST00000487747 COG2Q14746 738 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 SLC17A1Q14916 467 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 KYNUQ16719 465 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 KRBOX4Q5JUW0 171 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 ZNF776Q68DI1 518 aaPredicted RBP2.6□□□□□ -1.99
SMC4-219ENST00000487747 Q6P435 159 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 GCNT7Q6ZNI0 430 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 TMEM182Q6ZP80 229 aaPredicted RBP2.6□□□□□ -1.99
SMC4-219ENST00000487747 C11orf57Q6ZUT1 292 aaPredicted RBP2.6□□□□□ -1.99
SMC4-219ENST00000487747 MEX3DQ86XN8 651 aaKnown RBP2.6□□□□□ -1.99
SMC4-219ENST00000487747 ENTHD1Q8IYW4 607 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 OR2L5Q8NG80 312 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 GANCQ8TET4 914 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 FAF2Q96CS3 445 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 ERGIC2Q96RQ1 377 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 TTYH2Q9BSA4 534 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 LMAN1LQ9HAT1 526 aa2.6□□□□□ -1.99
SMC4-219ENST00000487747 A0A0B4J203 849 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 CCDC162PA2VCL2 907 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 PGLSO95336 258 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 ACTL6AO96019 429 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 GJB2P29033 226 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 PRKAR2BP31323 418 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 CNPY1Q3B7I2 92 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 ANKRD55Q3KP44 614 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 TXNRD3NBQ6F5E7 133 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 KRT80Q6KB66 452 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 ABRAXAS1Q6UWZ7 409 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 CREBRFQ8IUR6 639 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 GPR137CQ8N3F9 429 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 FBXW8Q8N3Y1 598 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 TMEM99Q8N816 258 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 VN1R17PQ8TDU5 208 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 SLCO4A1Q96BD0 722 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 RMDN1Q96DB5 314 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 TECTBQ96PL2 329 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 SLF1Q9BQI6 1058 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 ZNF665Q9H7R5 613 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 ABCC13Q9NSE7 274 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 MLXQ9UH92 298 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 TMED7Q9Y3B3 224 aa2.59□□□□□ -1.99
SMC4-219ENST00000487747 ZFP37Q9Y6Q3 630 aaPredicted RBP2.59□□□□□ -1.99
SMC4-219ENST00000487747 IGKV6-21A0A0C4DH24 114 aa2.58□□□□□ -2
SMC4-219ENST00000487747 C2orf92A0A1B0GVN3 265 aa2.58□□□□□ -2
SMC4-219ENST00000487747 ANKDD1BA6NHY2 528 aa2.58□□□□□ -2
SMC4-219ENST00000487747 CSO75390 466 aaKnown RBP2.58□□□□□ -2
SMC4-219ENST00000487747 APBB3O95704 486 aa2.58□□□□□ -2
SMC4-219ENST00000487747 ASNSP08243 561 aa2.58□□□□□ -2
SMC4-219ENST00000487747 P4HA1P13674 534 aa2.58□□□□□ -2
SMC4-219ENST00000487747 GNB2P62879 340 aa2.58□□□□□ -2
SMC4-219ENST00000487747 MECOMQ03112 1051 aa2.58□□□□□ -2
SMC4-219ENST00000487747 CETN1Q12798 172 aa2.58□□□□□ -2
SMC4-219ENST00000487747 PAN3Q58A45 887 aaKnown RBP2.58□□□□□ -2
SMC4-219ENST00000487747 LYPLAL1Q5VWZ2 237 aa2.58□□□□□ -2
SMC4-219ENST00000487747 CFAP161Q6P656 301 aa2.58□□□□□ -2
SMC4-219ENST00000487747 BRINP3Q76B58 766 aa2.58□□□□□ -2
SMC4-219ENST00000487747 SEPT8Q92599 483 aa2.58□□□□□ -2
SMC4-219ENST00000487747 RAB3CQ96E17 227 aa2.58□□□□□ -2
SMC4-219ENST00000487747 NUDT16L1Q9BRJ7 211 aaKnown RBP2.58□□□□□ -2
SMC4-219ENST00000487747 TRIM7Q9C029 511 aa2.58□□□□□ -2
SMC4-219ENST00000487747 IL1RL2Q9HB29 575 aa2.58□□□□□ -2
SMC4-219ENST00000487747 FAM212BQ9NTI7 297 aaPredicted RBP2.58□□□□□ -2
SMC4-219ENST00000487747 SPG21Q9NZD8 308 aa2.58□□□□□ -2
SMC4-219ENST00000487747 KLRF1Q9NZS2 232 aa2.58□□□□□ -2
SMC4-219ENST00000487747 TMEM9Q9P0T7 183 aa2.58□□□□□ -2
SMC4-219ENST00000487747 EXOC6BQ9Y2D4 811 aa2.58□□□□□ -2
SMC4-219ENST00000487747 MTF2Q9Y483 593 aaPredicted RBP2.58□□□□□ -2
SMC4-219ENST00000487747 TRIOBPQ9H2D6 2365 aa2.57□□□□□ -2
SMC4-219ENST00000487747 SYNDIG1LA6NDD5 238 aa2.57□□□□□ -2
SMC4-219ENST00000487747 CCDC188H7C350 402 aa2.57□□□□□ -2
SMC4-219ENST00000487747 SLC33A1O00400 549 aaPredicted RBP2.57□□□□□ -2
SMC4-219ENST00000487747 GPAA1O43292 621 aa2.57□□□□□ -2
SMC4-219ENST00000487747 TBX10O75333 385 aa2.57□□□□□ -2
SMC4-219ENST00000487747 FCGR3AP08637 254 aa2.57□□□□□ -2
SMC4-219ENST00000487747 WNT4P56705 351 aa2.57□□□□□ -2
SMC4-219ENST00000487747 RPL27P61353 136 aaKnown RBP2.57□□□□□ -2
SMC4-219ENST00000487747 FKBP1BP68106 108 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms