RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 DSPPQ9NZW4 1301 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 HEPACAM2A8MVW5 462 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ADM5C9JUS6 153 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 H7C0S8 307 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ATG13O75143 517 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 NCR1O76036 304 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 PRAMEF12O95522 483 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 IFNA16P05015 189 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ETFAP13804 333 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 CXCL3P19876 107 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 HOXD9P28356 352 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-208ENST00000486641 SLC6A1P30531 599 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 IRS1P35568 1242 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 TMEM201Q5SNT2 666 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 RNLSQ5VYX0 342 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 MFSD14CQ5VZR4 134 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF770Q6IQ21 691 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ANGPTL8Q6UXH0 198 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF852Q6ZMS4 543 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 LAPTM4BQ86VI4 370 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 SERPINA9Q86WD7 417 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 SPATA2LQ8IUW3 424 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-208ENST00000486641 TCEANCQ8N8B7 351 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 CSGALNACT1Q8TDX6 532 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ST8SIA4Q92187 359 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 EID2BQ96D98 161 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ZSWIM3Q96MP5 696 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 PRR14Q9BWN1 585 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 C1QTNF6Q9BXI9 259 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 CDCP1Q9H5V8 836 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 EMC7Q9NPA0 242 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 GPATCH2Q9NW75 528 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 RDH8Q9NYR8 311 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 REV1Q9UBZ9 1251 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 FKBP7Q9Y680 259 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 AP1M2Q9Y6Q5 423 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 NLRC5Q86WI3 1866 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 C2orf78A6NCI8 922 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 GABRR3A8MPY1 467 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 CASKO14936 926 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 LZTS3O60299 673 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-208ENST00000486641 FZD6O60353 706 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 PRAMEF4O60810 478 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 OR4Q2P0C623 313 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 DPEP1P16444 411 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 CR2P20023 1033 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 RPS12P25398 132 aaKnown RBP10.16□□□□□ -0.78
CCDC171-208ENST00000486641 GSTM5P46439 218 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 BDKRB1P46663 353 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 GBX2P52951 348 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-208ENST00000486641 FABP5Q01469 135 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 PLA1AQ53H76 456 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 OR2G6Q5TZ20 316 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 PRAMEF9Q5VWM5 478 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ASB18Q6ZVZ8 466 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 ADGRD2Q7Z7M1 963 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 MON1AQ86VX9 555 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 BMPERQ8N8U9 685 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 KLHDC9Q8NEP7 349 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 OR52I1Q8NGK6 324 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 OR8K5Q8NH50 307 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 NFKBIDQ8NI38 313 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 DACT3Q96B18 629 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-208ENST00000486641 LINC00052Q96N35 136 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 SPON2Q9BUD6 331 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 CLEC4MQ9H2X3 399 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-208ENST00000486641 GHITMQ9H3K2 345 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 NT5DC2Q9H857 520 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 LATS2Q9NRM7 1088 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 SRRDQ9UH36 339 aa10.16□□□□□ -0.78
CCDC171-208ENST00000486641 DIMT1Q9UNQ2 313 aaKnown RBP10.16□□□□□ -0.78
CCDC171-208ENST00000486641 TRAV6A0A075B6T7 132 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 KHNYNO15037 678 aaKnown RBP10.15□□□□□ -0.78
CCDC171-208ENST00000486641 LANCL1O43813 399 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 B3GAT3O94766 335 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 PAHP00439 452 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 SYPP08247 313 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 ANXA5P08758 320 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF7P17097 686 aaPredicted RBP10.15□□□□□ -0.78
CCDC171-208ENST00000486641 STOMP27105 288 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 GPR15P49685 360 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF81P51508 661 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 RAB14P61106 215 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 B2MP61769 119 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 BOP1Q14137 746 aaKnown RBP10.15□□□□□ -0.78
CCDC171-208ENST00000486641 GPRC6AQ5T6X5 926 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 SHEQ5VZ18 495 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 METTL2BQ6P1Q9 378 aaKnown RBP10.15□□□□□ -0.78
CCDC171-208ENST00000486641 CFAP77Q6ZQR2 320 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 RTL4Q6ZR62 310 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 QSOX2Q6ZRP7 698 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 KIAA0907Q7Z7F0 614 aaPredicted RBP10.15□□□□□ -0.78
CCDC171-208ENST00000486641 ZBTB2Q8N680 514 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 PLA2G15Q8NCC3 412 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 OR52H1Q8NGJ2 320 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 GATAD2BQ8WXI9 593 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 SLC9A6Q92581 669 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 FCRL1Q96LA6 429 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 HDHD2Q9H0R4 259 aa10.15□□□□□ -0.78
CCDC171-208ENST00000486641 RDH14Q9HBH5 336 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms