RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 C1orf226A1L170 272 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 SYNDIG1LA6NDD5 238 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 TCP11X1B4DZS4 312 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 SDHDO14521 159 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 SOCS6O14544 535 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 EDF1O60869 148 aaKnown RBP18.71■□□□□ 0.59
COL6A2-208ENST00000485591 CTNSO60931 367 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 PRKRAO75569 313 aaKnown RBP18.71■□□□□ 0.59
COL6A2-208ENST00000485591 MAOAP21397 527 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 MAPK1P28482 360 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 TAS2R50P59544 299 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 SLC13A2Q13183 592 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 NSDHLQ15738 373 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 FAAH2Q6GMR7 532 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 OR52E8Q6IFG1 317 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 MAVSQ7Z434 540 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 C16orf78Q8WTQ4 265 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 TANKQ92844 425 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 TSLPQ969D9 159 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 VPS50Q96JG6 964 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 PTCHD1Q96NR3 888 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 FAIM2Q9BWQ8 316 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 AKTIPQ9H8T0 292 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 MYNNQ9NPC7 610 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 NECTIN3Q9NQS3 549 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 C19orf25Q9UFG5 118 aaPredicted RBP18.71■□□□□ 0.59
COL6A2-208ENST00000485591 WBP11Q9Y2W2 641 aaKnown RBP18.71■□□□□ 0.59
COL6A2-208ENST00000485591 PCDHA9Q9Y5H5 950 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 CLDN16Q9Y5I7 305 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 USH1CQ9Y6N9 552 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 CELSR3Q9NYQ7 3312 aa18.71■□□□□ 0.59
COL6A2-208ENST00000485591 DMXL2Q8TDJ6 3036 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 TCRBV16S1A1N1A0A5B0 115 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 ZNF195O14628 629 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 IL3P08700 152 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 ALOX15P16050 662 aaPredicted RBP18.7■□□□□ 0.58
COL6A2-208ENST00000485591 SDC1P18827 310 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 PPP2R1BP30154 601 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 CXADRP78310 365 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 MAD2L1Q13257 205 aaPredicted RBP18.7■□□□□ 0.58
COL6A2-208ENST00000485591 ATP1A4Q13733 1029 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 KIRREL2Q6UWL6 708 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 LANCL3Q6ZV70 420 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 IKBIPQ70UQ0 350 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 ANKRD37Q7Z713 158 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 FNDC5Q8NAU1 212 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.7■□□□□ 0.58
COL6A2-208ENST00000485591 MAELQ96JY0 434 aaKnown RBP18.7■□□□□ 0.58
COL6A2-208ENST00000485591 CATSPER2Q96P56 530 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 POLHQ9Y253 713 aa18.7■□□□□ 0.58
COL6A2-208ENST00000485591 ANKRD11Q6UB99 2663 aaPredicted RBP18.69■□□□□ 0.58
COL6A2-208ENST00000485591 TPRP12270 2363 aaKnown RBP18.69■□□□□ 0.58
COL6A2-208ENST00000485591 TGFBR3LH3BV60 316 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 PEX12O00623 359 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 LDB3O75112 727 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 DRD2P14416 443 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 ERVK-8P63133 956 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 IGLV3-21P80748 117 aaPredicted RBP18.69■□□□□ 0.58
COL6A2-208ENST00000485591 EMX2Q04743 252 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 HEPACAMQ14CZ8 416 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 VWA5B1Q5TIE3 1220 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 LARP4Q71RC2 724 aaKnown RBP eCLIP18.69■□□□□ 0.58
COL6A2-208ENST00000485591 CLNKQ7Z7G1 428 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 C7orf57Q8NEG2 295 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 OR11G2Q8NGC1 345 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 DNAJB14Q8TBM8 379 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 ANKRD9Q96BM1 317 aaPredicted RBP18.69■□□□□ 0.58
COL6A2-208ENST00000485591 C8orf44Q96CB5 159 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 MESP1Q9BRJ9 268 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 P4HTMQ9NXG6 502 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 ASIC5Q9NY37 505 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 PTPRQQ9UMZ3 2332 aa18.69■□□□□ 0.58
COL6A2-208ENST00000485591 ZFHX4Q86UP3 3567 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 GLOD5A6NK44 160 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 FGF17O60258 216 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 TGDSO95455 350 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 COX6A1P12074 109 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 BCKDHAP12694 445 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 LBPP18428 481 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 TACR1P25103 407 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 STX4Q12846 297 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 SERTAD2Q14140 314 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 FAM71E1Q6IPT2 247 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 OGFOD2Q6N063 350 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 SLC48A1Q6P1K1 146 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 CPEB2Q7Z5Q1 589 aaKnown RBP18.68■□□□□ 0.58
COL6A2-208ENST00000485591 PARP9Q8IXQ6 854 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 MMP21Q8N119 569 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 TMEM132CQ8N3T6 1108 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 UCN3Q969E3 161 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 C1orf50Q9BV19 199 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 WDR55Q9H6Y2 383 aaPredicted RBP18.68■□□□□ 0.58
COL6A2-208ENST00000485591 NOP53Q9NZM5 478 aaKnown RBP18.68■□□□□ 0.58
COL6A2-208ENST00000485591 HEY2Q9UBP5 337 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 MAN2B2Q9Y2E5 1009 aa18.68■□□□□ 0.58
COL6A2-208ENST00000485591 IGHV1-45A0A0A0MS14 117 aa18.67■□□□□ 0.58
COL6A2-208ENST00000485591 PGRMC2O15173 223 aa18.67■□□□□ 0.58
COL6A2-208ENST00000485591 GPR75O95800 540 aa18.67■□□□□ 0.58
COL6A2-208ENST00000485591 PRPS2P11908 318 aa18.67■□□□□ 0.58
COL6A2-208ENST00000485591 EPHA3P29320 983 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms