RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 R3HDM2Q9Y2K5 976 aaKnown RBP5.35□□□□□ -1.55
NHLRC3-205ENST00000485407 SAR1BQ9Y6B6 198 aa5.35□□□□□ -1.55
NHLRC3-205ENST00000485407 TMEM131Q92545 1883 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 ATXN2Q99700 1313 aaKnown RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 LOC102723996A0A087X1L8 192 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 C1orf232A0A0U1RR37 186 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 A0A1B0GTQ1 180 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 OR6C76A6NM76 312 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CAPN14A8MX76 684 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 GPR89AB7ZAQ6 455 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 MCIDASD6RGH6 385 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CCDC188H7C350 402 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 KIF2AO00139 706 aaPredicted RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 HCRTR2O43614 444 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 ZBTB14O43829 449 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 SCAF4O95104 1147 aaKnown RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 TRIM16O95361 564 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 AP2A1O95782 977 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 ONECUT2O95948 504 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 WNT1P04628 370 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 GPR89BP0CG08 455 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 EDN2P20800 178 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 LHCGRP22888 699 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 PSMB4P28070 264 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 ADRA1AP35348 466 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 SPINT3P49223 89 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 FNTAP49354 379 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CCT8P50990 548 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 STC1P52823 247 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 THOP1P52888 689 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 DCDC1P59894 354 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 HNRNPKP61978 463 aaKnown RBP eCLIP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CDK16Q00536 496 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CBX3Q13185 183 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 GAB1Q13480 694 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 LAMB3Q13751 1172 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 WSCD2Q2TBF2 565 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 ARL13AQ5H913 290 aaPredicted RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 KCTD11Q693B1 232 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 PNCKQ6P2M8 343 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 GCNT7Q6ZNI0 430 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 RBPMS2Q6ZRY4 209 aaKnown RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 Q6ZSR6 202 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CAMKMTQ7Z624 323 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 SLC9B2Q86UD5 537 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 PARGQ86W56 976 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 MMP21Q8N119 569 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 PRELID2Q8N945 189 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 TP53I13Q8NBR0 393 aaPredicted RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CAMKVQ8NCB2 501 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 LPCAT1Q8NF37 534 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 IPMKQ8NFU5 416 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 SPATA22Q8NHS9 363 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CCDC110Q8TBZ0 833 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 BRSK1Q8TDC3 778 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 C1orf54Q8WWF1 131 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 PEX13Q92968 403 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 MAGOHBQ96A72 148 aaKnown RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 TRIM44Q96DX7 344 aaPredicted RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 NUS1Q96E22 293 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 OXNAD1Q96HP4 312 aaPredicted RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 BOD1Q96IK1 185 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 GNRHR2Q96P88 292 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 PLEKHG4BQ96PX9 1271 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 SNX18Q96RF0 628 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 BBS4Q96RK4 519 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 ZSCAN5AQ9BUG6 496 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 WRAP53Q9BUR4 548 aaKnown RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 APOOQ9BUR5 198 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 SLC25A23Q9BV35 468 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 TRIM2Q9C040 744 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 GAREM1Q9H706 876 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 NRIP3Q9NQ35 241 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 HPF1Q9NWY4 346 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CHCHD3Q9NX63 227 aaKnown RBP5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 PLAGL1Q9UM63 463 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 ITM2BQ9Y287 266 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 FAM96BQ9Y3D0 163 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CMAHPQ9Y471 501 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 CSNK1G3Q9Y6M4 447 aa5.34□□□□□ -1.55
NHLRC3-205ENST00000485407 LRRK2Q5S007 2527 aa5.34□□□□□ -1.56
NHLRC3-205ENST00000485407 PIKFYVEQ9Y2I7 2098 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 ZFC3H1O60293 1989 aaKnown RBP5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 KRT87PA6NCN2 255 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 NEMP2A6NFY4 417 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 C2orf81A6NN90 581 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 CACNB4O00305 520 aaPredicted RBP5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 NDC80O14777 642 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 RAD51BO15315 384 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 FLRT2O43155 660 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 PROM1O43490 865 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 SLCO2B1O94956 709 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 CLDN7O95471 211 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 GAS8O95995 478 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 IFNB1P01574 187 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 TFP02787 698 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 CSF2P04141 144 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 ALPIP09923 528 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 CDK4P11802 303 aa5.33□□□□□ -1.56
NHLRC3-205ENST00000485407 FCGR2AP12318 317 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms