RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 GALNT18Q6P9A2 607 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 CYP20A1Q6UW02 462 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 LGI4Q8N135 537 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 NFAM1Q8NET5 270 aaPredicted RBP14.88□□□□□ -0.03
UPF3A-208ENST00000484246 CHTF18Q8WVB6 975 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 SREK1Q8WXA9 508 aaKnown RBP14.88□□□□□ -0.03
UPF3A-208ENST00000484246 TANKQ92844 425 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 TLCD1Q96CP7 247 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 METTL2AQ96IZ6 378 aaKnown RBP14.88□□□□□ -0.03
UPF3A-208ENST00000484246 AGAP4Q96P64 663 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 KCNA7Q96RP8 456 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 LMF1Q96S06 567 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 MECRQ9BV79 373 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 RPF2Q9H7B2 306 aaKnown RBP14.88□□□□□ -0.03
UPF3A-208ENST00000484246 TNFRSF12AQ9NP84 129 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 TIMM22Q9Y584 194 aa14.88□□□□□ -0.03
UPF3A-208ENST00000484246 GCN1Q92616 2671 aaKnown RBP14.88□□□□□ -0.03
UPF3A-208ENST00000484246 A0A1W2PR48 441 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 CDK2AP1O14519 115 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 SUV39H1O43463 412 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 AIFM1O95831 613 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 CELA2AP08217 269 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 FGF4P08620 206 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 TRA2BP62995 288 aaKnown RBP14.87□□□□□ -0.03
UPF3A-208ENST00000484246 ACTN3Q08043 901 aaPredicted RBP14.87□□□□□ -0.03
UPF3A-208ENST00000484246 RAPSNQ13702 412 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 BTBD16Q32M84 506 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 SPIN4Q56A73 249 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 FAM219BQ5XKK7 198 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 ISLR2Q6UXK2 745 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 CUZD1Q86UP6 607 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 ARMC10Q8N2F6 343 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 BRIX1Q8TDN6 353 aaKnown RBP14.87□□□□□ -0.03
UPF3A-208ENST00000484246 ELP5Q8TE02 316 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 ANKRD9Q96BM1 317 aaPredicted RBP14.87□□□□□ -0.03
UPF3A-208ENST00000484246 HBEGFQ99075 208 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 RNF32Q9H0A6 362 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 TMBIM4Q9HC24 238 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 VTI1BQ9UEU0 232 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 FBXW2Q9UKT8 454 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 SPTA1P02549 2419 aa14.87□□□□□ -0.03
UPF3A-208ENST00000484246 BSNQ9UPA5 3926 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 GOLGA6L10A6NI86 522 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 GUCY1B2O75343 617 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 RSL1D1O76021 490 aaKnown RBP14.86□□□□□ -0.03
UPF3A-208ENST00000484246 KLK1P06870 262 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 ITGAMP11215 1152 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 CHN1P15882 459 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 PRPH2P23942 346 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 GSTM5P46439 218 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 MPP2Q14168 576 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 ARL13AQ5H913 290 aaPredicted RBP14.86□□□□□ -0.03
UPF3A-208ENST00000484246 KANK2Q63ZY3 851 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 C18orf63Q68DL7 685 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 OR52E8Q6IFG1 317 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 C1orf52Q8N6N3 182 aaKnown RBP14.86□□□□□ -0.03
UPF3A-208ENST00000484246 RBMXL3Q8N7X1 1067 aaKnown RBP14.86□□□□□ -0.03
UPF3A-208ENST00000484246 B3GNT7Q8NFL0 401 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 PELOQ9BRX2 385 aaKnown RBP14.86□□□□□ -0.03
UPF3A-208ENST00000484246 CENPHQ9H3R5 247 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 EPS8L2Q9H6S3 715 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 WDR41Q9HAD4 459 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 EML4Q9HC35 981 aaKnown RBP14.86□□□□□ -0.03
UPF3A-208ENST00000484246 ARGLU1Q9NWB6 273 aaPredicted RBP14.86□□□□□ -0.03
UPF3A-208ENST00000484246 TEX10Q9NXF1 929 aaPredicted RBP14.86□□□□□ -0.03
UPF3A-208ENST00000484246 MCM8Q9UJA3 840 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 CCL27Q9Y4X3 112 aa14.86□□□□□ -0.03
UPF3A-208ENST00000484246 COL6A6A6NMZ7 2263 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 ARHGAP10A1A4S6 786 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 AZIN1O14977 448 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 KALRNO60229 2985 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 FGF17O60258 216 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 CRCPO75575 148 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 SORBS2O94875 1100 aaKnown RBP14.85□□□□□ -0.03
UPF3A-208ENST00000484246 SNUPNO95149 360 aaKnown RBP14.85□□□□□ -0.03
UPF3A-208ENST00000484246 CHRNGP07510 517 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 NEFHP12036 1026 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 ARRB2P32121 409 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 CASRP41180 1078 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 STT3AP46977 705 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 GPR143P51810 404 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 MAPK12P53778 367 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 HMGCS1Q01581 520 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 STX4Q12846 297 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 CCNYL2Q5T2Q4 361 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 Q6ZS92 163 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 CLNKQ7Z7G1 428 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 TMEM132CQ8N3T6 1108 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 TEX19Q8NA77 164 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 APCDD1LQ8NCL9 501 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 OR14A16Q8NHC5 309 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 FAM76AQ8TAV0 307 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 DNAJB14Q8TBM8 379 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 DAZLQ92904 295 aaKnown RBP14.85□□□□□ -0.03
UPF3A-208ENST00000484246 PNPLA2Q96AD5 504 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 ALOXE3Q9BYJ1 711 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 VIPAS39Q9H9C1 493 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 TEKT2Q9UIF3 430 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 PIEZO2Q9H5I5 2752 aa14.85□□□□□ -0.03
UPF3A-208ENST00000484246 LDB3O75112 727 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms