RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 VN1R1Q9GZP7 353 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 IQCGQ9H095 443 aaKnown RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF700Q9H0M5 742 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 TSPAN10Q9H1Z9 355 aaPredicted RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 KLHL31Q9H511 634 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 BRF2Q9HAW0 419 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 LYRM4Q9HD34 91 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 DMRT3Q9NQL9 472 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 NMRK1Q9NWW6 199 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 MS4A12Q9NXJ0 267 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 AHSPQ9NZD4 102 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 HCN3Q9P1Z3 774 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 TRPS1Q9UHF7 1281 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 SNX6Q9UNH7 406 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 SPACA6W5XKT8 324 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 C2CD3Q4AC94 2353 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 LRBAP50851 2863 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 IGHV3-20A0A0C4DH32 117 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 TLDC2A0PJX2 215 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 SMIM23A6NLE4 172 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 CLDN4O14493 209 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 PLIN3O60664 434 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 DIAPH2O60879 1101 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 SUPT7LO94864 414 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 CLDN14O95500 239 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 STATHP02808 62 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 PROCP04070 461 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 ENO1P06733 434 aaKnown RBP9.36□□□□□ -0.91
CPSF4-213ENST00000484112 PCNAP12004 261 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 HSD3B1P14060 373 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 HIST1H1TP22492 207 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-213ENST00000484112 HSD3B2P26439 372 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 KIR3DL1P43629 444 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 RAB38P57729 211 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 BTN3A2P78410 334 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 RHAGQ02094 409 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 LCP2Q13094 533 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 IFT88Q13099 833 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 TRAF3Q13114 568 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 PCOLCEQ15113 449 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 TERF2Q15554 542 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 CPSF6Q16630 551 aaKnown RBP eCLIP9.36□□□□□ -0.91
CPSF4-213ENST00000484112 AP5B1Q2VPB7 878 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 MINDY4Q4G0A6 757 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF766Q5HY98 468 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 MFSD4BQ5TF39 518 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 FRG2Q64ET8 278 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 FCRLBQ6BAA4 426 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 NCCRP1Q6ZVX7 275 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-213ENST00000484112 MYLK4Q86YV6 388 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF595Q8IYB9 648 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 CA13Q8N1Q1 262 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 ZCCHC7Q8N3Z6 543 aaKnown RBP9.36□□□□□ -0.91
CPSF4-213ENST00000484112 BANPQ8N9N5 519 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 OR52B6Q8NGF0 335 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 CHTF18Q8WVB6 975 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 PEX11GQ96HA9 241 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 FRG2BQ96QU4 278 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 SMC6Q96SB8 1091 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 ELOVL6Q9H5J4 265 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 ZBTB26Q9HCK0 441 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 SSU72Q9NP77 194 aaKnown RBP9.36□□□□□ -0.91
CPSF4-213ENST00000484112 PRDM9Q9NQV7 894 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 PRDM7Q9NQW5 492 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 KLHL1Q9NR64 748 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 LANCL2Q9NS86 450 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 OXSMQ9NWU1 459 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 ANKRD10Q9NXR5 420 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 TEKT2Q9UIF3 430 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 ADAM29Q9UKF5 820 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 DAPP1Q9UN19 280 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 RNF11Q9Y3C5 154 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 F8P00451 2351 aa9.36□□□□□ -0.91
CPSF4-213ENST00000484112 ANKRD17O75179 2603 aaKnown RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 SERTM1A2A2V5 107 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 LRRC14BA6NHZ5 514 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 NPIPA5E9PKD4 350 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 G3V2L1 256 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 ZNHIT1O43257 154 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 PRMT3O60678 531 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 SEC24DO94855 1032 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 ESRRBO95718 433 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 KRT6AP02538 564 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 KRT6BP04259 564 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 CPA3P15088 417 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 ATP5A1P25705 553 aaKnown RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 ARL1P40616 181 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 KRT6CP48668 564 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 RAP1GDS1P52306 607 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 PLA2G16P53816 162 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 LIM2P55344 173 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 SNRPNP63162 240 aaKnown RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 ALDH6A1Q02252 535 aaKnown RBP9.35□□□□□ -0.91
CPSF4-213ENST00000484112 TLE4Q04727 773 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 NSDHLQ15738 373 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 EXT1Q16394 746 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 UNC50Q53HI1 259 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 LIPMQ5VYY2 423 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 PLAG1Q6DJT9 500 aa9.35□□□□□ -0.91
CPSF4-213ENST00000484112 TTC19Q6DKK2 380 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms