RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 TFAP2AP05549 437 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 ANXA4P09525 319 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SLC35G6P0C7Q6 338 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 CD59P13987 128 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SDC1P18827 310 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 TACR1P25103 407 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 TIA1P31483 386 aaKnown RBP eCLIP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 TTKP33981 857 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 STXBP1P61764 594 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 PTGR1Q14914 329 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SLC36A3Q495N2 470 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 TOR1AIP1Q5JTV8 583 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 MCATQ8IVS2 390 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 RIMKLAQ8IXN7 391 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 EID3Q8N140 333 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 CAMKVQ8NCB2 501 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 WDR48Q8TAF3 677 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 PNPT1Q8TCS8 783 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SDCCAG3Q96C92 435 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 MS4A6EQ96DS6 147 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 PRPF18Q99633 342 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 CHID1Q9BWS9 393 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 EBPLQ9BY08 206 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SLC6A16Q9GZN6 736 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 AICDAQ9GZX7 198 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 KLHL31Q9H511 634 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 RPF2Q9H7B2 306 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 PDE7BQ9NP56 450 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SEMA5BQ9P283 1151 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 ATXN7L1Q9ULK2 861 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SNRNP200O75643 2136 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 TRBV5-3A0A0A0MS03 114 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 C9JVG2 144 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SOCS2O14508 198 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 PCDH7O60245 1069 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 EIF2S1P05198 315 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 KLK1P06870 262 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 GSTT1P30711 240 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 BSGP35613 385 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 ASMTP46597 345 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 PLA2G16P53816 162 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 ABHD18Q0P651 414 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SNAP47Q5SQN1 464 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 PAGE2Q7Z2X7 111 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 PRSS42Q7Z5A4 293 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 UBE3DQ7Z6J8 389 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 DHRSXQ8N5I4 330 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 KCT2Q8NC54 265 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SRFBP1Q8NEF9 429 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 OR2L5Q8NG80 312 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 ZNF583Q96ND8 569 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 QRFPRQ96P65 431 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 THUMPD3Q9BV44 507 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SORBS1Q9BX66 1292 aaKnown RBP16.29■□□□□ 0.2
MRPL28-210ENST00000483764 PARD6AQ9NPB6 346 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 SOHLH2Q9NX45 425 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 FTSJ1Q9UET6 329 aa16.29■□□□□ 0.2
MRPL28-210ENST00000483764 GNG14A0A1W2PPG7 69 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 TRIM64A6NGJ6 449 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 TRIM64CA6NLI5 447 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 RTCAO00442 366 aaKnown RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 TOX3O15405 576 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 ERI3O43414 337 aaKnown RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 HCRTR1O43613 425 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 SRPX2O60687 465 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 PPIBP23284 216 aaKnown RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 CAPGP40121 348 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 MLLT3P42568 568 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 ARL4DP49703 201 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 ARFIP1P53367 373 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 OR4D2P58180 307 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 VSX2P58304 361 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 HSD11B2P80365 405 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 TGM3Q08188 693 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 MANEAQ5SRI9 462 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 OR4C11Q6IEV9 310 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 ERICH5Q6P6B1 374 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 ABHD17CQ6PCB6 329 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 ZNF574Q6ZN55 896 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 MICU2Q8IYU8 434 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 DTWD1Q8N5C7 304 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 ZNF655Q8N720 491 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 CSNK1A1LQ8N752 337 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 CLHC1Q8NHS4 586 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 TMEM74Q96NL1 305 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 TSSK3Q96PN8 268 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 DPYSL5Q9BPU6 564 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 C17orf62Q9BQA9 187 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 ZNF717Q9BY31 904 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-210ENST00000483764 LHX9Q9NQ69 397 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 DNAJB9Q9UBS3 223 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 OAZ3Q9UMX2 235 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 CORO2BQ9UQ03 480 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 GMEB1Q9Y692 573 aa16.28■□□□□ 0.2
MRPL28-210ENST00000483764 SAC3D1A6NKF1 404 aa16.27■□□□□ 0.2
MRPL28-210ENST00000483764 A8MU76 341 aa16.27■□□□□ 0.2
MRPL28-210ENST00000483764 ZNF701M0R085 212 aaPredicted RBP16.27■□□□□ 0.2
MRPL28-210ENST00000483764 ACOX3O15254 700 aa16.27■□□□□ 0.2
MRPL28-210ENST00000483764 ZSCAN9O15535 394 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms