RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 ATP6V0BQ99437 205 aa3.26□□□□□ -1.89
GTF3A-207ENST00000482655 CDX2Q99626 313 aaPredicted RBP3.26□□□□□ -1.89
GTF3A-207ENST00000482655 MCRIP2Q9BUT9 160 aaKnown RBP3.26□□□□□ -1.89
GTF3A-207ENST00000482655 DEFB129Q9H1M3 183 aa3.26□□□□□ -1.89
GTF3A-207ENST00000482655 C10orf88Q9H8K7 445 aa3.26□□□□□ -1.89
GTF3A-207ENST00000482655 AKAP7Q9P0M2 348 aaPredicted RBP3.26□□□□□ -1.89
GTF3A-207ENST00000482655 TRMT112Q9UI30 125 aaKnown RBP3.26□□□□□ -1.89
GTF3A-207ENST00000482655 NOCTQ9UK39 431 aaKnown RBP3.26□□□□□ -1.89
GTF3A-207ENST00000482655 ODF2LQ9ULJ1 636 aa3.26□□□□□ -1.89
GTF3A-207ENST00000482655 R4GN57 208 aa3.26□□□□□ -1.89
GTF3A-207ENST00000482655 MAST2Q6P0Q8 1798 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 CUL9Q8IWT3 2517 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 COL1A1P02452 1464 aaPredicted RBP3.25□□□□□ -1.89
GTF3A-207ENST00000482655 CCL15-CCL14A0A0B4J2E2 113 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 SYCE3A1L190 88 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 MEIOCA2RUB1 952 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 SLCO1B7G3V0H7 640 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 SLC22A2O15244 555 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 SCO2O43819 266 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 TRMUO75648 421 aaKnown RBP3.25□□□□□ -1.89
GTF3A-207ENST00000482655 GRAP2O75791 330 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 DFFBO76075 338 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 GAS8O95995 478 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 FAM157CP0CG43 387 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 PRKAR1AP10644 381 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 GP1BBP13224 206 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 DARSP14868 501 aaKnown RBP3.25□□□□□ -1.89
GTF3A-207ENST00000482655 FERP16591 822 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 CEACAM8P31997 349 aaPredicted RBP3.25□□□□□ -1.89
GTF3A-207ENST00000482655 SERPINB6P35237 376 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 OR3A3P47888 321 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 SERPINH1P50454 418 aaKnown RBP3.25□□□□□ -1.89
GTF3A-207ENST00000482655 SLC34A1Q06495 639 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 VGLL4Q14135 290 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 HERC3Q15034 1050 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 CCL15Q16663 113 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 AARDQ4LEZ3 155 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 PRSS55Q6UWB4 352 aaPredicted RBP3.25□□□□□ -1.89
GTF3A-207ENST00000482655 KIF6Q6ZMV9 814 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 PRUNE1Q86TP1 453 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 CCDC60Q8IWA6 550 aaPredicted RBP3.25□□□□□ -1.89
GTF3A-207ENST00000482655 AQP12AQ8IXF9 295 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 RCOR2Q8IZ40 523 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 TDHQ8IZJ6 230 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 LYG1Q8N1E2 194 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 KLHDC1Q8N7A1 406 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 OR8H1Q8NGG4 311 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 OR4C15Q8NGM1 316 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 MRGPRDQ8TDS7 321 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 SUSD6Q92537 303 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 C5orf30Q96GV9 206 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 PANX3Q96QZ0 392 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 OSBPL8Q9BZF1 889 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 TRIM15Q9C019 465 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 RAB9BQ9NP90 201 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 GPR173Q9NS66 373 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 EXOC1Q9NV70 894 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 BARHL2Q9NY43 387 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 OR6C2Q9NZP2 312 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 MAD2L2Q9UI95 211 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 AGTPBP1Q9UPW5 1226 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 HBS1LQ9Y450 684 aaKnown RBP3.25□□□□□ -1.89
GTF3A-207ENST00000482655 SMAD5-AS1Q9Y6J3 95 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 FRMPD3Q5JV73 1810 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 MED23Q9ULK4 1368 aa3.25□□□□□ -1.89
GTF3A-207ENST00000482655 PHIPQ8WWQ0 1821 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 NOTCH3Q9UM47 2321 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 E5RGE8 158 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 KLF11O14901 512 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 HSF2BPO75031 334 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 GLRA3O75311 464 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 PRDM1O75626 825 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 CDK2AP2O75956 126 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 AKAP3O75969 853 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 OLFM2O95897 454 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 PTMAP06454 111 aaKnown RBP3.24□□□□□ -1.89
GTF3A-207ENST00000482655 YES1P07947 543 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 EIF2S2P20042 333 aaKnown RBP3.24□□□□□ -1.89
GTF3A-207ENST00000482655 ZNF10P21506 573 aaPredicted RBP3.24□□□□□ -1.89
GTF3A-207ENST00000482655 NKX2-1P43699 371 aaPredicted RBP3.24□□□□□ -1.89
GTF3A-207ENST00000482655 DNA2P51530 1060 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 CLDN17P56750 224 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 B3GALT5-AS1P59052 145 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 LCP2Q13094 533 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 SGCGQ13326 291 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 PPA1Q15181 289 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 SGCBQ16585 318 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 LPAL2Q16609 132 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 ARMCX4Q5H9R4 360 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 PM20D1Q6GTS8 502 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 PLBD1Q6P4A8 553 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 NHLRC1Q6VVB1 395 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 MACC1Q6ZN28 852 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 ZNF444Q8N0Y2 327 aaPredicted RBP3.24□□□□□ -1.89
GTF3A-207ENST00000482655 RTL3Q8N8U3 475 aaKnown RBP3.24□□□□□ -1.89
GTF3A-207ENST00000482655 GBP7Q8N8V2 638 aaPredicted RBP3.24□□□□□ -1.89
GTF3A-207ENST00000482655 KBTBD8Q8NFY9 601 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 OR7A2PQ8NGA2 310 aa3.24□□□□□ -1.89
GTF3A-207ENST00000482655 OR2T6Q8NHC8 308 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms