RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SLC25A13Q9UJS0 675 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 SNX11Q9Y5W9 270 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 H3BQ06 376 aaPredicted RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 GAPDHSO14556 408 aaPredicted RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 IDSP22304 550 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 PFN3P60673 137 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 B4GALNT1Q00973 533 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 MGAT3Q09327 533 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 CDK10Q15131 360 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 CEP78Q5JTW2 689 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 CHST9Q7L1S5 443 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 IQCHQ86VS3 1027 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 RNFT2Q96EX2 444 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 KCTD7Q96MP8 289 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 OR2A14Q96R47 310 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 NELL2Q99435 816 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 ZNF717Q9BY31 904 aaPredicted RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 REEP4Q9H6H4 257 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 TMEM39AQ9NV64 488 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 ING3Q9NXR8 418 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 STMN3Q9NZ72 180 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 MAT2BQ9NZL9 334 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 TBC1D24Q9ULP9 559 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 RPL36Q9Y3U8 105 aaKnown RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 A0A1W2PRU2 124 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 SLC30A4O14863 429 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 PDE9AO76083 593 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 H1F0P07305 194 aaKnown RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 UQCRC1P31930 480 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 MRPL19P49406 292 aaKnown RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 ZNF91Q05481 1191 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 SSX1Q16384 188 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 TATDN3Q17R31 274 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 GPAT3Q53EU6 434 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 SMARCD3Q6STE5 483 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 PRR23CQ6ZRP0 262 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 NLGN4YQ8NFZ3 816 aaPredicted RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 POF1BQ8WVV4 589 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 POP5Q969H6 163 aaKnown RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 AP2M1Q96CW1 435 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 MAPKAP1Q9BPZ7 522 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 TTTY10Q9BZA0 68 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 CCDC59Q9P031 241 aaKnown RBP12.14□□□□□ -0.47
VPS52-218ENST00000482399 ENOPH1Q9UHY7 261 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 ENPP4Q9Y6X5 453 aa12.14□□□□□ -0.47
VPS52-218ENST00000482399 PRKAR1AP10644 381 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 AP1S2P56377 157 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 PTSQ03393 145 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 IDNKQ5T6J7 187 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 MZT2BQ6NZ67 158 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 OR8H3Q8N146 312 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 SYNPOQ8N3V7 929 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 ZNF557Q8N988 423 aaPredicted RBP12.13□□□□□ -0.47
VPS52-218ENST00000482399 COL26A1Q96A83 441 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 GABARAPL1Q9H0R8 117 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 OSGEPL1Q9H4B0 414 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 RRAGCQ9HB90 399 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 STOX2Q9P2F5 926 aaPredicted RBP12.13□□□□□ -0.47
VPS52-218ENST00000482399 SEC14L4Q9UDX3 406 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 ITM2BQ9Y287 266 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 CD8B2A6NJW9 211 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 CSO75390 466 aaKnown RBP12.13□□□□□ -0.47
VPS52-218ENST00000482399 OR2B3O76000 313 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 CD8BP10966 210 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 PCGF2P35227 344 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 MAPK12P53778 367 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 PDZD3Q86UT5 571 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 MARCH9Q86YJ5 346 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.13□□□□□ -0.47
VPS52-218ENST00000482399 OR5D16Q8NGK9 328 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 OR5H6Q8NGV6 325 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 DEDD2Q8WXF8 326 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 LINC01599Q8WXQ3 324 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 CCDC32Q9BV29 185 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 MND1Q9BWT6 205 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 RDH14Q9HBH5 336 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 ACER3Q9NUN7 267 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 MCUBQ9NWR8 336 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 NOS1APO75052 506 aaPredicted RBP12.13□□□□□ -0.47
VPS52-218ENST00000482399 TOXO94900 526 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 ACLYP53396 1101 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 TBPL1P62380 186 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 MBTPS1Q14703 1052 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 PSME4Q14997 1843 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 KLHL12Q53G59 568 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 MTFR2Q6P444 385 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 LINC00299Q6ZSB3 139 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 OXR1Q8N573 874 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 SLC37A3Q8NCC5 494 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 OR6C4Q8NGE1 309 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 TRMT61AQ96FX7 289 aaKnown RBP12.13□□□□□ -0.47
VPS52-218ENST00000482399 TMEM19Q96HH6 336 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 OPALINQ96PE5 141 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 PITX2Q99697 317 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 OR2AG1Q9H205 316 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 RNF121Q9H920 327 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 SPATA2Q9UM82 520 aa12.13□□□□□ -0.47
VPS52-218ENST00000482399 ALPK2Q86TB3 2170 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms