RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 LCLAT1Q6UWP7 414 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 NHLRC1Q6VVB1 395 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 SIGLEC15Q6ZMC9 328 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 FRRS1Q6ZNA5 592 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 C17orf107Q6ZR85 190 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 ZC3H3Q8IXZ2 948 aaKnown RBP3.25□□□□□ -1.89
CBX3-207ENST00000481300 SLC22A15Q8IZD6 547 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 ELMOD1Q8N336 334 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 RNF149Q8NC42 400 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 SEPT8Q92599 483 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 WBP2Q969T9 261 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 LURAP1Q96LR2 239 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 FAM218AQ96MZ4 157 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 AGAP3Q96P47 875 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 PANX3Q96QZ0 392 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 UBAC1Q9BSL1 405 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 SLC5A7Q9GZV3 580 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 NAPBQ9H115 298 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 AKIRIN1Q9H9L7 192 aaPredicted RBP3.25□□□□□ -1.89
CBX3-207ENST00000481300 NLGN3Q9NZ94 848 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 TMED7Q9Y3B3 224 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 WIPI2Q9Y4P8 454 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 AHDC1Q5TGY3 1603 aaPredicted RBP3.25□□□□□ -1.89
CBX3-207ENST00000481300 NCAPD2Q15021 1401 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 CEMIPQ8WUJ3 1361 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 PLEKHG2Q9H7P9 1386 aa3.25□□□□□ -1.89
CBX3-207ENST00000481300 MEGF6O75095 1541 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 CAMTA1Q9Y6Y1 1673 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 A0A087X0K7 114 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 ZNF732B4DXR9 585 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 MLNRO43193 412 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 NME6O75414 186 aaPredicted RBP3.24□□□□□ -1.89
CBX3-207ENST00000481300 HOXB7P09629 217 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 SBK2P0C263 348 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 DPEP1P16444 411 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 EIF2S2P20042 333 aaKnown RBP3.24□□□□□ -1.89
CBX3-207ENST00000481300 GPR183P32249 361 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 COPB2P35606 906 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 FEN1P39748 380 aaKnown RBP3.24□□□□□ -1.89
CBX3-207ENST00000481300 LUMP51884 338 aaPredicted RBP3.24□□□□□ -1.89
CBX3-207ENST00000481300 TMEM50BP56557 158 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 GSCP56915 257 aaPredicted RBP3.24□□□□□ -1.89
CBX3-207ENST00000481300 CNTN1Q12860 1018 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 SLC39A6Q13433 755 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 CEACAM7Q14002 265 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 MOGAT2Q3SYC2 334 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 C14orf177Q52M58 125 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 IFI44LQ53G44 452 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 SPANXN4Q5MJ08 99 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 FAAP20Q6NZ36 180 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 RFPL4BQ6ZWI9 263 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 TTC5Q8N0Z6 440 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 METTL4Q8N3J2 472 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 OR13C5Q8NGS8 318 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 PSMA8Q8TAA3 256 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 EXOC6Q8TAG9 804 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 PTP4A1Q93096 173 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 BPIFA2Q96DR5 249 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 CCDC43Q96MW1 224 aaKnown RBP3.24□□□□□ -1.89
CBX3-207ENST00000481300 SYT11Q9BT88 431 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 TRIM7Q9C029 511 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 MRPL17Q9NRX2 175 aaKnown RBP3.24□□□□□ -1.89
CBX3-207ENST00000481300 CWC25Q9NXE8 425 aaPredicted RBP3.24□□□□□ -1.89
CBX3-207ENST00000481300 SPG21Q9NZD8 308 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 BAIAP2L1Q9UHR4 511 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 STX8Q9UNK0 236 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 ZHX2Q9Y6X8 837 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 OVOS2A0A0G2JMS6 1433 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 MON2Q7Z3U7 1717 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 ABCC6O95255 1503 aa3.24□□□□□ -1.89
CBX3-207ENST00000481300 KIF16BQ96L93 1317 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 LOC105371242A0A075B767 164 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 IGKV3D-15A0A087WSY6 115 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.23□□□□□ -1.89
CBX3-207ENST00000481300 A0A1W2PRV1 198 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 SMIM30A4D0T7 59 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 MPTX1A8MV57 137 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 NPIPB9F8W1W9 429 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 CACNB4O00305 520 aaPredicted RBP3.23□□□□□ -1.89
CBX3-207ENST00000481300 TFECO14948 347 aaPredicted RBP3.23□□□□□ -1.89
CBX3-207ENST00000481300 DCXO43602 365 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 LRCH4O75427 683 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 MTRF1O75570 445 aaKnown RBP3.23□□□□□ -1.89
CBX3-207ENST00000481300 GAS8O95995 478 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 ZSCAN5DPP0CG00 497 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 MYOGP15173 224 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 AOC1P19801 751 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 UGT1A4P22310 534 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 BTG1P62324 171 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 ZNF177Q13360 481 aaPredicted RBP3.23□□□□□ -1.89
CBX3-207ENST00000481300 RPS6KA1Q15418 735 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 ITSN1Q15811 1721 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 ZNF772Q68DY9 489 aaPredicted RBP3.23□□□□□ -1.89
CBX3-207ENST00000481300 TMEM270Q6UE05 265 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 Q71RC1 249 aaPredicted RBP3.23□□□□□ -1.89
CBX3-207ENST00000481300 THEM5Q8N1Q8 247 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 SLC43A2Q8N370 569 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 MSANTD4Q8NCY6 345 aa3.23□□□□□ -1.89
CBX3-207ENST00000481300 OR9Q2Q8NGE9 314 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms