RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	CENPK	Q9BS16	269 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	LRFN1	Q9P244	771 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	VTI1B	Q9UEU0	232 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZNF225	Q9UK10	706 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	SPACA6	W5XKT8	324 aa		12	□□□□□ -0.49
ABCF3-215	ENST00000481116	USP9X	Q93008	2570 aa	Predicted RBP	12	□□□□□ -0.49
ABCF3-215	ENST00000481116		A0A0A6YYD5	115 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	GLOD5	A6NK44	160 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	TMEM200C	A6NKL6	621 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	FOXE1	O00358	373 aa	Predicted RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	NEURL1	O76050	574 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	SUPT7L	O94864	414 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	OR4F21	O95013	312 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	EDN3	P14138	238 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	TNNI3	P19429	210 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	TAC1	P20366	129 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	TNFRSF8	P28908	595 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	HSD17B3	P37058	310 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	TDGF1P3	P51864	188 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	KCNK10	P57789	538 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	TNFRSF17	Q02223	184 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	CLC	Q05315	142 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	CUL3	Q13618	768 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	ELAVL1	Q15717	326 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZNF678	Q5SXM1	525 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	FRG2	Q64ET8	278 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	MRM1	Q6IN84	353 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	GALNTL5	Q7Z4T8	443 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	TMEM132C	Q8N3T6	1108 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	EIF1AD	Q8N9N8	165 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	EPS8L3	Q8TE67	593 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	NR4A3	Q92570	626 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	PPWD1	Q96BP3	646 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	FRG2B	Q96QU4	278 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	HBEGF	Q99075	208 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	CCDC77	Q9BR77	488 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	MRPL1	Q9BYD6	325 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	OR8D2	Q9GZM6	311 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	C12orf65	Q9H3J6	166 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	RPF2	Q9H7B2	306 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	FETUB	Q9UGM5	382 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	EMCN	Q9ULC0	261 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	PPIE	Q9UNP9	301 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	OSGIN2	Q9Y236	505 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	ASB4	Q9Y574	426 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	CLCA3P	Q9Y6N3	262 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	GTF3C1	Q12789	2109 aa		11.99	□□□□□ -0.49
ABCF3-215	ENST00000481116	FLNB	O75369	2602 aa	Known RBP	11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	HECTD1	Q9ULT8	2610 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	PTPN13	Q12923	2485 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116		A0A1W2PR48	441 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116		A0A1W2PS29	197 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	C17orf105	B2RV13	164 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	PROM1	O43490	865 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	ITGA10	O75578	1167 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	DDAH2	O95865	285 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	PDYN	P01213	254 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	SP1	P08047	785 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	FAM58BP	P0C7Q3	252 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	HERVK_113	P63132	956 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	FOLH1	Q04609	750 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	IFT88	Q13099	833 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	SERTAD2	Q14140	314 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	TERF2	Q15554	542 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	MAPKAPK3	Q16644	382 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	CYP20A1	Q6UW02	462 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	LGI4	Q8N135	537 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	OR2W6P	Q8NHA6	318 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	SLC2A12	Q8TD20	617 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	ACMSD	Q8TDX5	336 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	SSC4D	Q8WTU2	575 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	SCMH1	Q96GD3	660 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	SERPINI1	Q99574	410 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	C1QTNF3	Q9BXJ4	246 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	ERVK-6	Q9BXR3	956 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	DDX31	Q9H8H2	851 aa	Known RBP	11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	PSD3	Q9NYI0	1048 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	PHF11	Q9UIL8	331 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	ICE1	Q9Y2F5	2266 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	MYO7B	Q6PIF6	2116 aa		11.98	□□□□□ -0.49
ABCF3-215	ENST00000481116	DIDO1	Q9BTC0	2240 aa	Known RBP	11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	HRK	O00198	91 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	WWP2	O00308	870 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	FCHO1	O14526	889 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	PGRMC2	O15173	223 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	SLC25A12	O75746	678 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	ZFAND5	O76080	213 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	AIFM1	O95831	613 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	OTC	P00480	354 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	KLK1	P06870	262 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	GSTA1	P08263	222 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	CD46	P15529	392 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	IMPDH1	P20839	514 aa		11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	ATP5F1	P24539	256 aa	Predicted RBP	11.97	□□□□□ -0.49
ABCF3-215	ENST00000481116	TLX1	P31314	330 aa	Predicted RBP	11.97	□□□□□ -0.49

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