RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 FTSJ1Q9UET6 329 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 PHF11Q9UIL8 331 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 USP22Q9UPT9 525 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 RALGAPA1Q6GYQ0 2036 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 CROCCQ5TZA2 2017 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 FAM227AF5H4B4 570 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 CLIC1O00299 241 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 NR2F6P10588 404 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 DDX5P17844 614 aaKnown RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 ACP1P24666 158 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 GSK3BP49841 420 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 HNRNPFP52597 415 aaKnown RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 EEFSECP57772 596 aaKnown RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 SIM1P81133 766 aaPredicted RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 TNFRSF17Q02223 184 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 FAM53BQ14153 422 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 TRIM25Q14258 630 aaKnown RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 GARNL3Q5VVW2 1013 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 ZNF551Q7Z340 670 aaPredicted RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 C10orf67Q8IYJ2 551 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 METTL27Q8N6F8 245 aaPredicted RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 NATD1Q8N6N6 113 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 TTC29Q8NA56 475 aaPredicted RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 OR10A6Q8NH74 314 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 GOT1L1Q8NHS2 421 aaPredicted RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 ZNF501Q96CX3 271 aaPredicted RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 ZNF764Q96H86 408 aaPredicted RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 SH3GL1Q99961 368 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 DPYSL5Q9BPU6 564 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 ECSITQ9BQ95 431 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 NPLQ9BXD5 320 aaPredicted RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 ALG2Q9H553 416 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 RPF2Q9H7B2 306 aaKnown RBP10.59□□□□□ -0.71
APTX-223ENST00000479656 TMEM9BQ9NQ34 198 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 MS4A12Q9NXJ0 267 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 TAS2R9Q9NYW1 312 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 SERTAD3Q9UJW9 196 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 VPS4AQ9UN37 437 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 CLCA2Q9UQC9 943 aa10.59□□□□□ -0.71
APTX-223ENST00000479656 A0A1W2PS29 197 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 C4orf47A7E2U8 309 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 NTN3O00634 580 aaPredicted RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 ACOT8O14734 319 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 CHST10O43529 356 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 MGRN1O60291 552 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 ANKRD34CP0C6C1 535 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 ZCCHC18P0CG32 403 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 HSD17B1P14061 328 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 ALAS2P22557 587 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 TLX1P31314 330 aaPredicted RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 FEN1P39748 380 aaKnown RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 FRKP42685 505 aaPredicted RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 ACTR3P61158 418 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 SHC2P98077 582 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 MAT1AQ00266 395 aaKnown RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 DUSP2Q05923 314 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 FAM214AQ32MH5 1076 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 PHF19Q5T6S3 580 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 FBXW10Q5XX13 1052 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 OR4N5Q8IXE1 308 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 CCDC116Q8IYX3 515 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 C10orf111Q8N326 155 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 TMEM52Q8NDY8 209 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 HIPK4Q8NE63 616 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 PNPT1Q8TCS8 783 aaKnown RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 OR5P2Q8WZ92 322 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 MMABQ96EY8 250 aaPredicted RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 CNRIP1Q96F85 164 aaPredicted RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 ZNF583Q96ND8 569 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 BBS4Q96RK4 519 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 PRRX2Q99811 253 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 CPPED1Q9BRF8 314 aaPredicted RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 TRIM4Q9C037 500 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 GLIPR2Q9H4G4 154 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 PARD6AQ9NPB6 346 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 CUTCQ9NTM9 273 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 HCN3Q9P1Z3 774 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 NCDNQ9UBB6 729 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 SUCOQ9UBS9 1254 aaKnown RBP10.58□□□□□ -0.72
APTX-223ENST00000479656 EGFL7Q9UHF1 273 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 PSME2Q9UL46 239 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 SPACA6W5XKT8 324 aa10.58□□□□□ -0.72
APTX-223ENST00000479656 MYO1GB0I1T2 1018 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 CYR61O00622 381 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 ZNF749O43361 778 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 DNAJA2O60884 412 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 NSA2O95478 260 aaKnown RBP10.57□□□□□ -0.72
APTX-223ENST00000479656 NTRK1P04629 796 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 GP1BAP07359 652 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 MSL3P1P0C860 447 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 EMP3P54852 163 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 ITGA1P56199 1179 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 RAB38P57729 211 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 HSPB3Q12988 150 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 GAB1Q13480 694 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 SPIDRQ14159 915 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 FLOT2Q14254 428 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 CSRP2Q16527 193 aa10.57□□□□□ -0.72
APTX-223ENST00000479656 CLPPQ16740 277 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms