RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 RALGAPA1Q6GYQ0 2036 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 NOTCH4Q99466 2003 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 COL12A1Q99715 3063 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 TICRRQ7Z2Z1 1910 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 PIEZO2Q9H5I5 2752 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 TMEM150CB9EJG8 249 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 EPHB6O15197 1021 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 SELENOFO60613 162 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 PRAF2O60831 178 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 CIAO1O76071 339 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 NGFP01138 241 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 SERPING1P05155 500 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 GPIP06744 558 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 FAM157CP0CG43 387 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 HOXB8P17481 243 aaPredicted RBP4.41□□□□□ -1.7
RFC4-212ENST00000479307 CETN2P41208 172 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 GLIPR1P48060 266 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 MYL7Q01449 175 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 CNTN2Q02246 1040 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 YWHAHQ04917 246 aaPredicted RBP4.41□□□□□ -1.7
RFC4-212ENST00000479307 UGT3A1Q6NUS8 523 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 CASC4Q6P4E1 433 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 MEX3BQ6ZN04 569 aaKnown RBP4.41□□□□□ -1.7
RFC4-212ENST00000479307 TMEM179Q6ZVK1 233 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 HOOK3Q86VS8 718 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 CCDC60Q8IWA6 550 aaPredicted RBP4.41□□□□□ -1.7
RFC4-212ENST00000479307 LSMEM2Q8N112 164 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 ZNF843Q8N446 348 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 BSCL2Q96G97 398 aaPredicted RBP4.41□□□□□ -1.7
RFC4-212ENST00000479307 GDAP1L1Q96MZ0 367 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 PGLYRP2Q96PD5 576 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 GPATCH1Q9BRR8 931 aaKnown RBP4.41□□□□□ -1.7
RFC4-212ENST00000479307 DNAI2Q9GZS0 605 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 SHARPINQ9H0F6 387 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 RAI14Q9P0K7 980 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 HMG20BQ9P0W2 317 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 RAD50Q92878 1312 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 STK36Q9NRP7 1315 aa4.41□□□□□ -1.7
RFC4-212ENST00000479307 A0A0U1RQK1 487 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 ZNF320A2RRD8 509 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 C17orf105B2RV13 164 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 AP2A2O94973 939 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 MOCS2O96007 188 aaPredicted RBP4.4□□□□□ -1.71
RFC4-212ENST00000479307 PAK4O96013 591 aaPredicted RBP4.4□□□□□ -1.71
RFC4-212ENST00000479307 DCNP07585 359 aaKnown RBP4.4□□□□□ -1.71
RFC4-212ENST00000479307 STAG3L1P0CL83 205 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 DARSP14868 501 aaKnown RBP4.4□□□□□ -1.71
RFC4-212ENST00000479307 LHCGRP22888 699 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 PSMB4P28070 264 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 IL10RBQ08334 325 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 SQLEQ14534 574 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 OPCMLQ14982 345 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 FAM166AQ6J272 317 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 CYB5D1Q6P9G0 228 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 CTR9Q6PD62 1173 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 GPR141Q7Z602 305 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 IQCA1Q86XH1 822 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 TMCO5AQ8N6Q1 288 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 CCDC63Q8NA47 563 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 OR7G3Q8NG95 312 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 OR2T11Q8NH01 316 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 OR4C3Q8NH37 302 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 FIBINQ8TAL6 211 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 TMEM190Q8WZ59 177 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 ZNF689Q96CS4 500 aaPredicted RBP4.4□□□□□ -1.71
RFC4-212ENST00000479307 F2RL3Q96RI0 385 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 CCDC3Q9BQI4 270 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 SLCO1C1Q9NYB5 712 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 DDX49Q9Y6V7 483 aaKnown RBP4.4□□□□□ -1.71
RFC4-212ENST00000479307 PTPN13Q12923 2485 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 MYO9AB2RTY4 2548 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 C2orf16Q68DN1 1984 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 SPTA1P02549 2419 aa4.4□□□□□ -1.71
RFC4-212ENST00000479307 ARID2Q68CP9 1835 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 MYH4Q9Y623 1939 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 TRBV5-5A0A0J9YX44 114 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 A4D1N5 150 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 SDR42E2A6NKP2 422 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 SLC33A1O00400 549 aaPredicted RBP4.39□□□□□ -1.71
RFC4-212ENST00000479307 MPHOSPH10O00566 681 aaKnown RBP4.39□□□□□ -1.71
RFC4-212ENST00000479307 SP1P08047 785 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 LBPP18428 481 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 CHRNB4P30926 498 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 SFTPDP35247 375 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 NKX2-1P43699 371 aaPredicted RBP4.39□□□□□ -1.71
RFC4-212ENST00000479307 GCNT1Q02742 428 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 BTG3Q14201 252 aaPredicted RBP4.39□□□□□ -1.71
RFC4-212ENST00000479307 SLMAPQ14BN4 828 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 GPR33Q49SQ1 333 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 ODF2Q5BJF6 829 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 ZNF789Q5FWF6 425 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 SLC25A53Q5H9E4 307 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 FUT10Q6P4F1 479 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 BTNL8Q6UX41 500 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 GBP6Q6ZN66 633 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 PIWIL3Q7Z3Z3 882 aaKnown RBP4.39□□□□□ -1.71
RFC4-212ENST00000479307 RCOR2Q8IZ40 523 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 KLHDC1Q8N7A1 406 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 KBTBD8Q8NFY9 601 aa4.39□□□□□ -1.71
RFC4-212ENST00000479307 OR7A2PQ8NGA2 310 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms