RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 CLNKQ7Z7G1 428 aa21.81■■□□□ 1.08
C9orf3-215ENST00000478473 GPR180Q86V85 440 aa21.81■■□□□ 1.08
C9orf3-215ENST00000478473 UHMK1Q8TAS1 419 aaKnown RBP21.81■■□□□ 1.08
C9orf3-215ENST00000478473 TANKQ92844 425 aa21.81■■□□□ 1.08
C9orf3-215ENST00000478473 PHF21BQ96EK2 531 aa21.81■■□□□ 1.08
C9orf3-215ENST00000478473 EPB41L4BQ9H329 900 aa21.81■■□□□ 1.08
C9orf3-215ENST00000478473 YARS2Q9Y2Z4 477 aaKnown RBP21.81■■□□□ 1.08
C9orf3-215ENST00000478473 A0A0A6YYD5 115 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 SAP18O00422 153 aaKnown RBP21.8■■□□□ 1.08
C9orf3-215ENST00000478473 LDB3O75112 727 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 ETHE1O95571 254 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 CPN2P22792 545 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 RAP1GDS1P52306 607 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 PMP22Q01453 160 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 TNFRSF17Q02223 184 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 KRTCAP3Q53RY4 240 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 GFRALQ6UXV0 394 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 MYLK4Q86YV6 388 aaPredicted RBP21.8■■□□□ 1.08
C9orf3-215ENST00000478473 SIAH3Q8IW03 269 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 MYRIPQ8NFW9 859 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 TRIM44Q96DX7 344 aaPredicted RBP21.8■■□□□ 1.08
C9orf3-215ENST00000478473 SORBS1Q9BX66 1292 aaKnown RBP21.8■■□□□ 1.08
C9orf3-215ENST00000478473 RPF2Q9H7B2 306 aaKnown RBP21.8■■□□□ 1.08
C9orf3-215ENST00000478473 L2HGDHQ9H9P8 463 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 KLHL1Q9NR64 748 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 SEC14L3Q9UDX4 400 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 ATG4BQ9Y4P1 393 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 ASB4Q9Y574 426 aa21.8■■□□□ 1.08
C9orf3-215ENST00000478473 UNC79Q9P2D8 2635 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 LRRTM2O43300 516 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 PROM1O43490 865 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 PRKNO60260 465 aaPredicted RBP21.79■■□□□ 1.08
C9orf3-215ENST00000478473 SH3BGRLO75368 114 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 ITGA10O75578 1167 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 FAM153BP0C7A2 387 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 HNRNPH2P55795 449 aaKnown RBP21.79■■□□□ 1.08
C9orf3-215ENST00000478473 PER3P56645 1201 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 KCNK10P57789 538 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 FAM153CQ494X1 144 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 FRG2Q64ET8 278 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 GPALPP1Q8IXQ4 340 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 FAM98AQ8NCA5 519 aaKnown RBP21.79■■□□□ 1.08
C9orf3-215ENST00000478473 ACMSDQ8TDX5 336 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 ZNF483Q8TF39 744 aaPredicted RBP21.79■■□□□ 1.08
C9orf3-215ENST00000478473 SCYL1Q96KG9 808 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 GPR137Q96N19 417 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 NSUN5Q96P11 429 aaKnown RBP21.79■■□□□ 1.08
C9orf3-215ENST00000478473 FRG2BQ96QU4 278 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 SERPINI1Q99574 410 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 CCDC77Q9BR77 488 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 RYDENQ9NUL5 291 aaKnown RBP21.79■■□□□ 1.08
C9orf3-215ENST00000478473 LYARQ9NX58 379 aaKnown RBP21.79■■□□□ 1.08
C9orf3-215ENST00000478473 MYOTQ9UBF9 498 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 FBXW2Q9UKT8 454 aa21.79■■□□□ 1.08
C9orf3-215ENST00000478473 DIDO1Q9BTC0 2240 aaKnown RBP21.78■■□□□ 1.08
C9orf3-215ENST00000478473 FGF17O60258 216 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 WISP2O76076 250 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 UNC5CO95185 931 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 MLYCDO95822 493 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 IFNA16P05015 189 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 STT3AP46977 705 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 ST13P50502 369 aaKnown RBP21.78■■□□□ 1.08
C9orf3-215ENST00000478473 NEK2P51955 445 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 CCNG1P51959 295 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 SLC29A2Q14542 456 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 HSDL2Q6YN16 418 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 MAMDC2Q7Z304 686 aaPredicted RBP21.78■■□□□ 1.08
C9orf3-215ENST00000478473 POGLUT1Q8NBL1 392 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 MZB1Q8WU39 189 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 CDK15Q96Q40 435 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 ZNF835Q9Y2P0 537 aa21.78■■□□□ 1.08
C9orf3-215ENST00000478473 A8MT66 165 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 C17orf105B2RV13 164 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 TMPRSS11DO60235 418 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 EEDO75530 441 aaKnown RBP21.77■■□□□ 1.08
C9orf3-215ENST00000478473 CLDN1O95832 211 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 IGKV3-11P04433 115 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 RHOXF2BP0C7M4 288 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 TLX1P31314 330 aaPredicted RBP21.77■■□□□ 1.08
C9orf3-215ENST00000478473 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.77■■□□□ 1.08
C9orf3-215ENST00000478473 SLC2A12Q8TD20 617 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 ZNF721Q8TF20 911 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 ATP6V1E2Q96A05 226 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 TMEM125Q96AQ2 219 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 RHOXF2Q9BQY4 288 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 ADAM29Q9UKF5 820 aa21.77■■□□□ 1.08
C9orf3-215ENST00000478473 KLF13Q9Y2Y9 288 aaPredicted RBP21.77■■□□□ 1.08
C9orf3-215ENST00000478473 OTCP00480 354 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 GALNSP34059 522 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 BUD31P41223 144 aaPredicted RBP21.76■■□□□ 1.07
C9orf3-215ENST00000478473 CA7P43166 264 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 SSR4P51571 173 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 ALDH6A1Q02252 535 aaKnown RBP21.76■■□□□ 1.07
C9orf3-215ENST00000478473 MAPKAPK3Q16644 382 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 C18orf63Q68DL7 685 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 Q6ZPB1 254 aaPredicted RBP21.76■■□□□ 1.07
C9orf3-215ENST00000478473 NUDT13Q86X67 352 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 ST13P4Q8IZP2 240 aaPredicted RBP21.76■■□□□ 1.07
C9orf3-215ENST00000478473 TMEM156Q8N614 296 aa21.76■■□□□ 1.07
C9orf3-215ENST00000478473 OR4F6Q8NGB9 312 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms