RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PPLO60437 1756 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 DCCP43146 1447 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 MST1RQ04912 1400 aa3.35□□□□□ -1.87
FNDC3B-209ENST00000478016 IFT172Q9UG01 1749 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A087X1B8 175 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A0A6YYC8 382 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 TEX13CA0A0J9YWL9 993 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM237BA0A1B0GVD1 139 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 GNG14A0A1W2PPG7 69 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 PLSCR5A0PG75 271 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 RAB19A4D1S5 217 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 MBLAC1A4D2B0 266 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 MBD3L4A6NDZ8 208 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 MBD3L3A6NE82 208 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 WIPF3A6NGB9 483 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 OR2AG2A6NM03 316 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 MAGEB17A8MXT2 336 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 KCNU1A8MYU2 1149 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 TMEM238C9JI98 176 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 F5H697 171 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 H3BQ06 376 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 I3L1I5 382 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF213O14771 459 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 GPAA1O43292 621 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 DNPH1O43598 174 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 USP12O75317 370 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 BCAS1O75363 584 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 RASSF9O75901 435 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 GLCEO94923 617 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 NXPH2O95156 264 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 NADKO95544 446 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 ESRRBO95718 433 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 TMEM191BP0C7N4 346 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 ATXN1LP0C7T5 689 aaKnown RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 TRIM49P0CI25 452 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 TRIM49CP0CI26 452 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 PSKH1P11801 424 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 IGFBP2P18065 325 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 NR1D1P20393 614 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 GATA3P23771 443 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 EEF1B2P24534 225 aaKnown RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 OTX1P32242 354 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 PBX3P40426 434 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 KCNJ1P48048 391 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 HCAR3P49019 387 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 TIRAPP58753 221 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 UBE2G2P60604 165 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 ERVS71-1P61550 626 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 RAB11AP62491 216 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 REEP5Q00765 189 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 ECT2LQ008S8 904 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 BNC1Q01954 994 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 RAD51Q06609 339 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 C2orf54Q08AI8 447 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 IFFO1Q0D2I5 559 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 BFSP2Q13515 415 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 RAB32Q13637 225 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC17A1Q14916 467 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 STXBP2Q15833 593 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 RAB11BQ15907 218 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 EZH2Q15910 746 aaKnown RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 C18orf21Q32NC0 220 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 NDUFAF6Q330K2 333 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 EPHA10Q5JZY3 1008 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 CELF3Q5SZQ8 465 aaKnown RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 C6orf183Q5T699 404 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 DDI2Q5TDH0 399 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 NCR3LG1Q68D85 454 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 NADSYN1Q6IA69 706 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 ELP2Q6IA86 826 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 DUS1LQ6P1R4 473 aaKnown RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 VWA1Q6PCB0 445 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 FBXO46Q6PJ61 603 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 C5orf46Q6UWT4 87 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM151BQ6UXP7 276 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 Q6ZNX1 250 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 EIF3MQ7L2H7 374 aaKnown RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 SYT13Q7L8C5 426 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 TRIM69Q86WT6 500 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 SFR1Q86XK3 245 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 MMAAQ8IVH4 418 aaKnown RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 KLHL7Q8IXQ5 586 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 CENPLQ8N0S6 344 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM89BQ8N5H3 189 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 LRRC17Q8N6Y2 441 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM86B1Q8N7N1 296 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 UXS1Q8NBZ7 420 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 TMEM116Q8NCL8 245 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 OR2V1Q8NHB1 315 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 GRHL3Q8TE85 626 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 SELENOMQ8WWX9 145 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 ARNTL2Q8WYA1 636 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 TMBIM1Q969X1 311 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 CPNE4Q96A23 557 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 ELP4Q96EB1 424 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM84BQ96KN1 310 aaPredicted RBP3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF583Q96ND8 569 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 LRRC3BQ96PB8 259 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 BTBD9Q96Q07 612 aa3.34□□□□□ -1.87
FNDC3B-209ENST00000478016 SIGLEC11Q96RL6 698 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms