RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 FBXW2Q9UKT8 454 aa16.52■□□□□ 0.23
PTPN7-209ENST00000477554 TMEM114B3SHH9 223 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 PSMD12O00232 456 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-209ENST00000477554 PRKNO60260 465 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-209ENST00000477554 LDB3O75112 727 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 GBAP04062 536 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 RNF224P0DH78 156 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 JAK1P23458 1154 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 GSTM2P28161 218 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 GYS2P54840 703 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 UNC50Q53HI1 259 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 DEPDC1Q5TB30 811 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 LIPJQ5W064 366 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 H3F3CQ6NXT2 135 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 LETMD1Q6P1Q0 360 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 RIPOR1Q6ZS17 1223 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 RGS9BPQ6ZS82 235 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 ZCCHC23Q6ZST2 131 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 OR4N5Q8IXE1 308 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 ZNF321PQ8N8H1 164 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 OR1N1Q8NGS0 311 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 ZNF483Q8TF39 744 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-209ENST00000477554 SEC16BQ96JE7 1060 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 VPS50Q96JG6 964 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 SIGLEC12Q96PQ1 595 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 LMF1Q96S06 567 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 EPS8L2Q9H6S3 715 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 KCNK13Q9HB14 408 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 PRM3Q9NNZ6 103 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 MMP25Q9NPA2 562 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 PRTFDC1Q9NRG1 225 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 PNO1Q9NRX1 252 aaKnown RBP16.51■□□□□ 0.23
PTPN7-209ENST00000477554 STK38LQ9Y2H1 464 aa16.51■□□□□ 0.23
PTPN7-209ENST00000477554 SETXQ7Z333 2677 aaKnown RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 H0YIV9 168 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 TMPRSS11DO60235 418 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 MYO1DO94832 1006 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 MLYCDO95822 493 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 CYC1P08574 325 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 HIST1H1TP22492 207 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 TNFSF10P50591 281 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 HNRNPH2P55795 449 aaKnown RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 ARG2P78540 354 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 GALNT1Q10472 559 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 RCN2Q14257 317 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 ZNF169Q14929 603 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 NR6A1Q15406 480 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 C18orf63Q68DL7 685 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 C16orf47Q6ZP98 133 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 DGAT2L6Q6ZPD8 337 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 FRMD7Q6ZUT3 714 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 HPS6Q86YV9 775 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 OR4F6Q8NGB9 312 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 M1APQ8TC57 530 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 ELP5Q8TE02 316 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 KCNC2Q96PR1 638 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 TAAR6Q96RI8 345 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 HBEGFQ99075 208 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 LPAR4Q99677 370 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 NPLQ9BXD5 320 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 COPS7BQ9H9Q2 264 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 LIN28AQ9H9Z2 209 aaKnown RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 EML4Q9HC35 981 aaKnown RBP16.5■□□□□ 0.23
PTPN7-209ENST00000477554 THAP1Q9NVV9 213 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 STMN3Q9NZ72 180 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 ADAM21Q9UKJ8 722 aa16.5■□□□□ 0.23
PTPN7-209ENST00000477554 USP9XQ93008 2570 aaPredicted RBP16.49■□□□□ 0.23
PTPN7-209ENST00000477554 A0A1W2PS29 197 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 SAGE2PA6NJ88 616 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 PCDH17O14917 1159 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 SSR2P43308 183 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 SLC1A6P48664 564 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 CCNG1P51959 295 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 ABCE1P61221 599 aaKnown RBP16.49■□□□□ 0.23
PTPN7-209ENST00000477554 SKP1P63208 163 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 PMP22Q01453 160 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 CLCQ05315 142 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 BST1Q10588 318 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 SLC13A2Q13183 592 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 SGO1Q5FBB7 561 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 ACER2Q5QJU3 275 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 OR4C11Q6IEV9 310 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 APCDD1LQ8NCL9 501 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 TRPC4APQ8TEL6 797 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 THAP3Q8WTV1 239 aaPredicted RBP16.49■□□□□ 0.23
PTPN7-209ENST00000477554 TM9SF4Q92544 642 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 ANKRD9Q96BM1 317 aaPredicted RBP16.49■□□□□ 0.23
PTPN7-209ENST00000477554 CMTM7Q96FZ5 175 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 BARD1Q99728 777 aaKnown RBP16.49■□□□□ 0.23
PTPN7-209ENST00000477554 GSTO2Q9H4Y5 243 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 ATG4BQ9Y4P1 393 aa16.49■□□□□ 0.23
PTPN7-209ENST00000477554 FGF17O60258 216 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 SNNO75324 88 aaPredicted RBP16.48■□□□□ 0.23
PTPN7-209ENST00000477554 SCELO95171 688 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 CLDN9O95484 217 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 HSPA4LO95757 839 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 BSGP35613 385 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 ARL1P40616 181 aaPredicted RBP16.48■□□□□ 0.23
PTPN7-209ENST00000477554 LCP2Q13094 533 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 SLAMF1Q13291 335 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms