RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 DCTN4Q9UJW0 460 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 KCND3Q9UK17 655 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 ASB4Q9Y574 426 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 MYO18BQ8IUG5 2567 aa14.43□□□□□ -0.1
SEC13-215ENST00000477547 A0A0G2JND7 137 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 VSTM2BA6NLU5 285 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 FAM227AF5H4B4 570 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 KLK10O43240 276 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 B4GALT2O60909 372 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 CD63P08962 238 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 F8A1P23610 371 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 TACR1P25103 407 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 PTPN4P29074 926 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 GSTM5P46439 218 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 HNRNPFP52597 415 aaKnown RBP14.42□□□□□ -0.1
SEC13-215ENST00000477547 TAS2R50P59544 299 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 TRA2BP62995 288 aaKnown RBP14.42□□□□□ -0.1
SEC13-215ENST00000477547 KLC1Q07866 573 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 SRSF6Q13247 344 aaKnown RBP14.42□□□□□ -0.1
SEC13-215ENST00000477547 ERV3-1Q14264 604 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 SMU1Q2TAY7 513 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 TUBB8Q3ZCM7 444 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 NDUFAF5Q5TEU4 345 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 C18orf63Q68DL7 685 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 OR52E8Q6IFG1 317 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 OGFOD2Q6N063 350 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 RIPOR1Q6ZS17 1223 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 LARP4Q71RC2 724 aaKnown RBP eCLIP14.42□□□□□ -0.1
SEC13-215ENST00000477547 TMEM151BQ8IW70 566 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 LIX1Q8N485 282 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 TMEM52Q8NDY8 209 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 CLHC1Q8NHS4 586 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 ACTRT2Q8TDY3 377 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 C16orf78Q8WTQ4 265 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 TSSK3Q96PN8 268 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 OR52B2Q96RD2 323 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 EBF4Q9BQW3 602 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 EFHD1Q9BUP0 239 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 FAIM2Q9BWQ8 316 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 GPR87Q9BY21 358 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 FAM117AQ9C073 453 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 FAM107BQ9H098 131 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 TCF7L2Q9NQB0 619 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 LANCL2Q9NS86 450 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 ASIC5Q9NY37 505 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 IL17BQ9UHF5 180 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 TCFL5Q9UL49 500 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 MKL2Q9ULH7 1088 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 EIF3LQ9Y262 564 aaKnown RBP14.42□□□□□ -0.1
SEC13-215ENST00000477547 FARSAQ9Y285 508 aaKnown RBP14.42□□□□□ -0.1
SEC13-215ENST00000477547 PCDHGA6Q9Y5G7 932 aa14.42□□□□□ -0.1
SEC13-215ENST00000477547 MRPS18BQ9Y676 258 aaKnown RBP14.42□□□□□ -0.1
SEC13-215ENST00000477547 A0A1W2PR48 441 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 IDSB3KWA1 339 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 CYR61O00622 381 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 KLF7O75840 302 aaPredicted RBP14.41□□□□□ -0.1
SEC13-215ENST00000477547 BCKDHAP12694 445 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 TLX1P31314 330 aaPredicted RBP14.41□□□□□ -0.1
SEC13-215ENST00000477547 ALDH9A1P49189 494 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 IDH3AP50213 366 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 SEC24CP53992 1094 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 EMX2Q04743 252 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 SF3A3Q12874 501 aaKnown RBP eCLIP14.41□□□□□ -0.18e-7■■□□□ 14.1
SEC13-215ENST00000477547 IL23RQ5VWK5 629 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 IKBIPQ70UQ0 350 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 GPR155Q7Z3F1 870 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 ZNF595Q8IYB9 648 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 MMP21Q8N119 569 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 TMEM132CQ8N3T6 1108 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 STARD8Q92502 1023 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 TMEM120AQ9BXJ8 343 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 VN1R1Q9GZP7 353 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 PRTFDC1Q9NRG1 225 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 C3orf18Q9UK00 162 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 MMACHCQ9Y4U1 282 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 HECTD1Q9ULT8 2610 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 C1orf226A1L170 272 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 BLACEA4D250 179 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 GLOD5A6NK44 160 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 E9PBE3 544 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 CLDN4O14493 209 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 RRP8O43159 456 aaKnown RBP14.41□□□□□ -0.1
SEC13-215ENST00000477547 PROM1O43490 865 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 KLHL41O60662 606 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 HEXBP07686 556 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 UMODP07911 640 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 ALDOCP09972 364 aaKnown RBP14.41□□□□□ -0.1
SEC13-215ENST00000477547 PRPS2P11908 318 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 ASMTP46597 345 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 EFNA3P52797 238 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 RHAGQ02094 409 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 SLC13A2Q13183 592 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 IL10RAQ13651 578 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 PTGR1Q14914 329 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 LSM12Q3MHD2 195 aaKnown RBP14.41□□□□□ -0.1
SEC13-215ENST00000477547 QSOX2Q6ZRP7 698 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 SPATA19Q7Z5L4 167 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 CLNKQ7Z7G1 428 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 SCUBE1Q8IWY4 988 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 CEP70Q8NHQ1 597 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms