RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 KIAA1191Q96A73 305 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 CFAP36Q96G28 342 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 GAL3ST4Q96RP7 486 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 SARGQ9BW04 601 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 NPLQ9BXD5 320 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 ALOXE3Q9BYJ1 711 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 REXO4Q9GZR2 422 aaKnown RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 DLL4Q9NR61 685 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 BOKQ9UMX3 212 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 CAMK2AQ9UQM7 478 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 RPH3AQ9Y2J0 694 aaPredicted RBP6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 ATG4BQ9Y4P1 393 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 SPACA6W5XKT8 324 aa6.17□□□□□ -1.42
RTFDC1-206ENST00000477485 HEATR5AQ86XA9 2040 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 A0A1B0GVC2 190 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 CLCA1A8K7I4 914 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 GOLGA6L6A8MZA4 724 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 CDC7O00311 574 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 DYRK3O43781 588 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 HCN1O60741 890 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 BANF1O75531 89 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 ATE1O95260 518 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 ENO2P09104 434 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 CCDC175P0C221 793 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 RFPL3SP0C7P2 107 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 SMIM10L1P0DMW3 83 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 C1GALT1C1LP0DN25 315 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 GNAZP19086 355 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 ENDOUP21128 410 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 HPDP32754 393 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 GDF5P43026 501 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 MSH2P43246 934 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 CPA2P48052 419 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 MASP1P48740 699 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 MTTPP55157 894 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 LIM2P55344 173 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 DCAF7P61962 342 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 NKX6-1P78426 367 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 TIAL1Q01085 375 aaKnown RBP eCLIP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 TGM3Q08188 693 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 C18orf21Q32NC0 220 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 HP1BP3Q5SSJ5 553 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 ARMC3Q5W041 872 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 SLC22A10Q63ZE4 541 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM45BPQ6NSW5 357 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 TMIGD1Q6UXZ0 262 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 KIF18BQ86Y91 864 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 TMEM139Q8IV31 216 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 P3H2Q8IVL5 708 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 ULK2Q8IYT8 1036 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 KRT78Q8N1N4 520 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 SNX31Q8N9S9 440 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 NAXEQ8NCW5 288 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 TTLQ8NG68 377 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 OR2L5Q8NG80 312 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 LINC01560Q8TB33 94 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 FAM45AQ8TCE6 357 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 DOK4Q8TEW6 326 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 MAGOHBQ96A72 148 aaKnown RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 MS4A6EQ96DS6 147 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 HSPBAP1Q96EW2 488 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 SMIM10Q96HG1 83 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 SGCZQ96LD1 299 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 DGAT2Q96PD7 388 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 TRIB1Q96RU8 372 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 SERINC2Q96SA4 455 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 KRT12Q99456 494 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 AICDAQ9GZX7 198 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 EPB41L4BQ9H329 900 aa6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF703Q9H7S9 590 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 NSD1Q96L73 2696 aaPredicted RBP6.16□□□□□ -1.42
RTFDC1-206ENST00000477485 LRIT2A6NDA9 550 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 SYNDIG1LA6NDD5 238 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 KDM4EB2RXH2 506 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 SYT5O00445 386 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 CES2O00748 559 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 ARHGEF9O43307 516 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF354AO60765 605 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 CTNSO60931 367 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 AHSGP02765 367 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 HEXAP06865 529 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 EPXP11678 715 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 PCNAP12004 261 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 CPN2P22792 545 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 GABRB3P28472 473 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 MAGEA6P43360 314 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 PPP2R2BQ00005 443 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 FOXO1Q12778 655 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 DUSP8Q13202 625 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 SERTAD2Q14140 314 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 ZNF460Q14592 562 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 EFTUD2Q15029 972 aaKnown RBP eCLIP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 PPP1R7Q15435 360 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 BBS9Q3SYG4 887 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 ACSF3Q4G176 576 aaPredicted RBP6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 FBXO48Q5FWF7 155 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 SPANXN3Q5MJ09 141 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 Q5PR19 223 aa6.15□□□□□ -1.42
RTFDC1-206ENST00000477485 ADNP2Q6IQ32 1131 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms