RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 POLR3FQ9H1D9 316 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 OR52A5Q9H2C5 316 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 FOXP1Q9H334 677 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ACTR5Q9H9F9 607 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 DNAJC4Q9NNZ3 241 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MMP25Q9NPA2 562 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 HINT3Q9NQE9 182 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 GSN-AS1Q9NRJ2 163 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MRPL17Q9NRX2 175 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MAN2C1Q9NTJ4 1040 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 DDX28Q9NUL7 540 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ANKRD10Q9NXR5 420 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PDP1Q9P0J1 537 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 GCNT4Q9P109 453 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 KLHL9Q9P2J3 617 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ADAM29Q9UKF5 820 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PRDM4Q9UKN5 801 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 CDH9Q9ULB4 789 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ACSL5Q9ULC5 683 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PACSIN2Q9UNF0 486 aaPredicted RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 FOXJ3Q9UPW0 622 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 ERVK-19Q9WJR5 959 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 NFE2L3Q9Y4A8 694 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 MYO5BQ9ULV0 1848 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 PLEKHH1Q9ULM0 1364 aa2.72□□□□□ -1.97
HMGN4-202ENST00000477243 DICER1Q9UPY3 1922 aaKnown RBP2.72□□□□□ -1.97
HMGN4-202ENST00000477243 SALL1Q9NSC2 1324 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CDC42BPGQ6DT37 1551 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 NBEAQ8NFP9 2946 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 NBASA2RRP1 2371 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 LOC105371242A0A075B767 164 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 A0A1W2PPV4 95 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SMCO3A2RU48 225 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TMEM89A2RUT3 159 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CCDC162PA2VCL2 907 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TMEM191CA6NGB0 347 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CD8B2A6NJW9 211 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ASB14A6NK59 587 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 GABRR3A8MPY1 467 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PDZK1P1A8MUH7 402 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 VGLL3A8MV65 326 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 MS4A18H0YCH9 400 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 H0YIG0 161 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CLDN5O00501 218 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZNF197O14709 1029 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ARPC1BO15143 372 aaKnown RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 MATN3O15232 486 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SAP30O75446 220 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 RPS6KA5O75582 802 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 GRAP2O75791 330 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CBR3O75828 277 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CLPXO76031 633 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TMCC1O94876 653 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CDK14O94921 469 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 NDUFB4O95168 129 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SYNGR4O95473 234 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ANP32DO95626 131 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PLA2G1BP04054 148 aaKnown RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CYP1A1P04798 512 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 GSTA2P09210 222 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 HIST1H2AGP0C0S8 130 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TMEM191BP0C7N4 346 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 SP9P0CG40 484 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TFPIP10646 304 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ENO3P13929 434 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ANPEPP15144 967 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZNF28P17035 718 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ITGB6P18564 788 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ACO1P21399 889 aaKnown RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 NT5EP21589 574 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 BMP5P22003 454 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 GATA3P23771 443 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 OTX1P32242 354 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 RPL9P32969 192 aaKnown RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 EPHX2P34913 555 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TRIM23P36406 574 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 HAAOP46952 286 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 OR3A1P47881 315 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 GLIPR1P48060 266 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ME1P48163 572 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 BCAP31P51572 246 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CCNG1P51959 295 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ATP12AP54707 1039 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 DAOAP59103 153 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PHEXP78562 749 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 BASP1P80723 227 aaKnown RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 NHLH2Q02577 135 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 MESP2Q0VG99 397 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 HYAL1Q12794 435 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CYLC2Q14093 348 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 CYP1B1Q16678 543 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 C2orf68Q2NKX9 166 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ZNF829Q3KNS6 432 aaPredicted RBP2.71□□□□□ -1.98
HMGN4-202ENST00000477243 AMZ1Q400G9 498 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 TMEM119Q4V9L6 283 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 ESCO2Q56NI9 601 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 DCAF6Q58WW2 860 aa2.71□□□□□ -1.98
HMGN4-202ENST00000477243 PPP6R3Q5H9R7 873 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms