RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 LYARQ9NX58 379 aaKnown RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 ZNF282Q9UDV7 671 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 GMEB2Q9UKD1 530 aa13.66□□□□□ -0.22
COL4A6-206ENST00000477085 ATXN7L1Q9ULK2 861 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-206ENST00000477085 SCN3AQ9NY46 2000 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 MN1Q10571 1320 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 ELOVL7A1L3X0 281 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 EME2A4GXA9 379 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 FAM220BPB1ANY3 271 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 SGK494L7N484 410 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 FOXS1O43638 330 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 B3GALT2O43825 422 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 ZBTB11O95625 1053 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 C8orf89P0DMQ9 161 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 PNLIPP16233 465 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 MLLT3P42568 568 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 SEPHS1P49903 392 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 MANFP55145 182 aaKnown RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 ABHD18Q0P651 414 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 RGNQ15493 299 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 SNAP47Q5SQN1 464 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 WDR74Q6RFH5 385 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 PLXDC1Q8IUK5 500 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 MICU2Q8IYU8 434 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 ZNF655Q8N720 491 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 TMEM52Q8NDY8 209 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 OR9A4Q8NGU2 314 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 CANT1Q8WVQ1 401 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 FAM120BQ96EK7 910 aaKnown RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 REXO5Q96IC2 774 aaKnown RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 GTPBP2Q9BX10 602 aaKnown RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 ROGDIQ9GZN7 287 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 MUC13Q9H3R2 512 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 EPB41L1Q9H4G0 881 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 PDE7BQ9NP56 450 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 SOHLH2Q9NX45 425 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 BCAP29Q9UHQ4 241 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 PCDHGB4Q9UN71 923 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 PLCL2Q9UPR0 1127 aa13.65□□□□□ -0.22
COL4A6-206ENST00000477085 NUP214P35658 2090 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-206ENST00000477085 ASXL3Q9C0F0 2248 aa13.65□□□□□ -0.23
COL4A6-206ENST00000477085 A0A1W2PQM1 296 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 AQP12BA6NM10 295 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 A8MU76 341 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 EVPLLA8MZ36 301 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 MYO1GB0I1T2 1018 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 FAM227AF5H4B4 570 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 CYR61O00622 381 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 YKT6O15498 198 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 GUCY1B2O75343 617 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 ERAL1O75616 437 aaKnown RBP13.64□□□□□ -0.23
COL4A6-206ENST00000477085 ALPPL2P10696 532 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 FEN1P39748 380 aaKnown RBP13.64□□□□□ -0.23
COL4A6-206ENST00000477085 MPLP40238 635 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 PTDSS1P48651 473 aaKnown RBP13.64□□□□□ -0.23
COL4A6-206ENST00000477085 TNFRSF17Q02223 184 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 HSPB3Q12988 150 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 MLC1Q15049 377 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 RABEPKQ7Z6M1 372 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 PROSER1Q86XN7 944 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 AQP12AQ8IXF9 295 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 ZZZ3Q8IYH5 903 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 CCDC116Q8IYX3 515 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 ADGRG5Q8IZF4 528 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 CA13Q8N1Q1 262 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 PSMA8Q8TAA3 256 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 NETO1Q8TDF5 533 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 RSRC1Q96IZ7 334 aaKnown RBP13.64□□□□□ -0.23
COL4A6-206ENST00000477085 LRGUKQ96M69 825 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 GORASP2Q9H8Y8 452 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 ACSS1Q9NUB1 689 aaPredicted RBP13.64□□□□□ -0.23
COL4A6-206ENST00000477085 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
COL4A6-206ENST00000477085 PCDHGA12O60330 932 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 CER1O95813 267 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 NR2F6P10588 404 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 ETFAP13804 333 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 FOLR1P15328 257 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 CPN2P22792 545 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 GCKP35557 465 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 CCL7P80098 99 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 SIM1P81133 766 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-206ENST00000477085 SQSTM1Q13501 440 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 CEBPEQ15744 281 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 CPZQ66K79 652 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 NATD1Q8N6N6 113 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 FIG4Q92562 907 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 SLC41A2Q96JW4 573 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 LYRM4Q9HD34 91 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 MAGEL2Q9UJ55 1249 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 SNX8Q9Y5X2 465 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 KMT2EQ8IZD2 1858 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 A0A0A6YYC8 382 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-206ENST00000477085 FITM1A5D6W6 292 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 I3L1I5 382 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-206ENST00000477085 CXCR6O00574 342 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 RDH16O75452 317 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 TNFRSF21O75509 655 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 UQCRC2P22695 453 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 SLC7A1P30825 629 aa13.63□□□□□ -0.23
COL4A6-206ENST00000477085 NCBP2P52298 156 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms