RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 H3BMH7 237 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 CLIC1O00299 241 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 FLRT2O43155 660 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 RDH16O75452 317 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 BCAS2O75934 225 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 TMTC4Q5T4D3 741 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 GARNL3Q5VVW2 1013 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 CA13Q8N1Q1 262 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 OR10A6Q8NH74 314 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 OR5P2Q8WZ92 322 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 KAT8Q9H7Z6 458 aaKnown RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 PDP2Q9P2J9 529 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 EGFL7Q9UHF1 273 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 A0A0A6YYC8 382 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 I3L1I5 382 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 FOXS1O43638 330 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 DNAJA2O60884 412 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 ERAL1O75616 437 aaKnown RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 LDOC1O95751 146 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 MANFP55145 182 aaKnown RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 TRAP1Q12931 704 aaKnown RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 ZNF551Q7Z340 670 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 C10orf111Q8N326 155 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 RHBDD1Q8TEB9 315 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 ZBED6CLQ96FA7 236 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 ZNF583Q96ND8 569 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 NPLQ9BXD5 320 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-211ENST00000476772 TRIM4Q9C037 500 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 MS4A12Q9NXJ0 267 aa27.24■■□□□ 1.95
VEGFA-211ENST00000476772 SPTBP11277 2137 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 IGHV5-10-1A0A0J9YXX1 117 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 CDX4O14627 284 aaPredicted RBP27.23■■□□□ 1.95
VEGFA-211ENST00000476772 OR2B3O76000 313 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 ANKRD34CP0C6C1 535 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 SOX11P35716 441 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 TCF15Q12870 199 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 BNIP2Q12982 314 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 FAM53BQ14153 422 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 GRM7Q14831 915 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 ARHGAP22Q7Z5H3 698 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 BHLHE22Q8NFJ8 381 aaPredicted RBP27.23■■□□□ 1.95
VEGFA-211ENST00000476772 OR1L3Q8NH93 324 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 ZFP90Q8TF47 636 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 DPYSL5Q9BPU6 564 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 TPT1P8Q9HAU6 139 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 ACSS1Q9NUB1 689 aaPredicted RBP27.23■■□□□ 1.95
VEGFA-211ENST00000476772 AP3M1Q9Y2T2 418 aa27.23■■□□□ 1.95
VEGFA-211ENST00000476772 CKMT2P17540 419 aa27.22■■□□□ 1.95
VEGFA-211ENST00000476772 OR4D2P58180 307 aa27.22■■□□□ 1.95
VEGFA-211ENST00000476772 SHC2P98077 582 aa27.22■■□□□ 1.95
VEGFA-211ENST00000476772 HSPB3Q12988 150 aa27.22■■□□□ 1.95
VEGFA-211ENST00000476772 TTC29Q8NA56 475 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-211ENST00000476772 PRSS33Q8NF86 280 aa27.22■■□□□ 1.95
VEGFA-211ENST00000476772 PNPT1Q8TCS8 783 aaKnown RBP27.22■■□□□ 1.95
VEGFA-211ENST00000476772 CNRIP1Q96F85 164 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-211ENST00000476772 RXFP3Q9NSD7 469 aa27.22■■□□□ 1.95
VEGFA-211ENST00000476772 EVPLLA8MZ36 301 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 KRT36O76013 467 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 MSL3P1P0C860 447 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 HTR1EP28566 365 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 NTSP30990 170 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 TLX1P31314 330 aaPredicted RBP27.21■■□□□ 1.95
VEGFA-211ENST00000476772 SIM1P81133 766 aaPredicted RBP27.21■■□□□ 1.95
VEGFA-211ENST00000476772 ZNF750Q32MQ0 723 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 GPR155Q7Z3F1 870 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 TRIML2Q8N7C3 387 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 RCBTB1Q8NDN9 531 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 JADE3Q92613 823 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 STMN2Q93045 179 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 CCDC74BQ96LY2 380 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 BBS4Q96RK4 519 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 GFM1Q96RP9 751 aaKnown RBP27.21■■□□□ 1.95
VEGFA-211ENST00000476772 SLC35A5Q9BS91 424 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 GLIPR2Q9H4G4 154 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 RPF2Q9H7B2 306 aaKnown RBP27.21■■□□□ 1.95
VEGFA-211ENST00000476772 CXorf36Q9H7Y0 433 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 ENAMQ9NRM1 1142 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 ACSL6Q9UKU0 697 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 ENTPD4Q9Y227 616 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 SPACA6W5XKT8 324 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 CACNA1HO95180 2353 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 COL5A1P20908 1838 aaPredicted RBP27.21■■□□□ 1.95
VEGFA-211ENST00000476772 A0A1W2PS29 197 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 NSA2O95478 260 aaKnown RBP27.21■■□□□ 1.95
VEGFA-211ENST00000476772 C8orf89P0DMQ9 161 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 SOAT1P35610 550 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 DUSP2Q05923 314 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 SPEM2Q0P670 501 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 MLC1Q15049 377 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 OR52E8Q6IFG1 317 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 PTRH1Q86Y79 214 aaKnown RBP27.21■■□□□ 1.95
VEGFA-211ENST00000476772 OR5AK3PQ8NH89 298 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 ATOH1Q92858 354 aaPredicted RBP27.21■■□□□ 1.95
VEGFA-211ENST00000476772 FAM120BQ96EK7 910 aaKnown RBP27.21■■□□□ 1.95
VEGFA-211ENST00000476772 AMDHD1Q96NU7 426 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 NEUROD4Q9HD90 331 aa27.21■■□□□ 1.95
VEGFA-211ENST00000476772 MYO1GB0I1T2 1018 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 PSMG1O95456 288 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 GZMMP51124 257 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 NCBP2P52298 156 aaKnown RBP eCLIP27.2■■□□□ 1.942e-27■■■□□ 16.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms