RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 NTNG1Q9Y2I2 539 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ATRXP46100 2492 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ANKRD61A6NGH8 418 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TSPAN4O14817 238 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SSNA1O43805 119 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 HCN1O60741 890 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 UGT2B11O75310 529 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CCNB2O95067 398 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 VNN2O95498 520 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 HLA-DQA2P01906 255 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 RPLP0P05388 317 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 HSD17B1P14061 328 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CEBPBP17676 345 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 PPP2R1BP30154 601 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 HLA-FP30511 346 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 HOXD12P35452 270 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 RPL4P36578 427 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 NCBP2P52298 156 aaKnown RBP eCLIP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ELP6Q0PNE2 266 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 GAB1Q13480 694 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SMU1Q2TAY7 513 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 IFI44LQ53G44 452 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 MED27Q6P2C8 311 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 DLEU7Q6UYE1 221 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 MTSS1LQ765P7 747 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ZSWIM9Q86XI8 627 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SERPINA12Q8IW75 414 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 NPAS3Q8IXF0 933 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SLC39A11Q8N1S5 342 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 VN1R2Q8NFZ6 395 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 OR6K6Q8NGW6 343 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 L3HYPDHQ96EM0 354 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SAMD11Q96NU1 681 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SPOCK3Q9BQ16 436 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF559Q9BR84 538 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ITPAQ9BY32 194 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 WDR12Q9GZL7 423 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 IRF2BPLQ9H1B7 796 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TRIT1Q9H3H1 467 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SERHL2Q9H4I8 314 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 NEK6Q9HC98 313 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SERHLQ9NQF3 203 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ARMC1Q9NVT9 282 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 KIAA1522Q9P206 1035 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CSNK1G3Q9Y6M4 447 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 OTOL1A6NHN0 477 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 OR6C75A6NL08 312 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CLDN24A6NM45 220 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 H3BNC9 293 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 PDPK1O15530 556 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ZW10O43264 779 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 PIP5K1CO60331 668 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SERPINB7O75635 380 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 RHOP08100 348 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ALAS2P22557 587 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 LHCGRP22888 699 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SSTR2P30874 369 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 XKP51811 444 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 GP2P55259 537 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 RGS8P57771 180 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 OC90Q02509 493 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TMEM115Q12893 351 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ILF2Q12905 390 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TOP3AQ13472 1001 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SLC5A12Q1EHB4 618 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 DEFB110Q30KQ9 67 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 IQCCQ4KMZ1 466 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 PABPC1LQ4VXU2 614 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 STEAP3Q658P3 488 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 FAM91A1Q658Y4 838 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 GTF2IRD2BQ6EKJ0 949 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CAPN13Q6MZZ7 669 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF613Q6PF04 617 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 KIAA1324Q6UXG2 1013 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 LIPIQ6XZB0 460 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CYS1Q717R9 158 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 GTF2IRD2Q86UP8 949 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 C17orf64Q86WR6 236 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 LAX1Q8IWV1 398 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 YAF2Q8IY57 180 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 OR4E2Q8NGC2 313 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 OR8K5Q8NH50 307 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 FAM174AQ8TBP5 190 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ZFPM2Q8WW38 1151 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 UCN3Q969E3 161 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ITFG2Q969R8 447 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SPACA7Q96KW9 195 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 FYTTD1Q96QD9 318 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TRIM45Q9H8W5 580 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 MED20Q9H944 212 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 NTN4Q9HB63 628 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CD320Q9NPF0 282 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SSR3Q9UNL2 185 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ANK1P16157 1881 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 THSD7BQ9C0I4 1608 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 LOC285095A0A1B0GVY8 99 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 ILVBLA1L0T0 632 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 FAM172BPA6NC97 362 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 MEIS3P1A6NDR6 274 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 ARHGEF33A8MVX0 844 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms