RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 EFCAB3Q8N7B9 438 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 TM4SF18Q96CE8 201 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 CCT7Q99832 543 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 EBPLQ9BY08 206 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 LRTM1Q9HBL6 345 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 FBXW2Q9UKT8 454 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 POLR3HQ9Y535 204 aaPredicted RBP13.53□□□□□ -0.24
CCNL1-217ENST00000476367 KCNMB2Q9Y691 235 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 NUP214P35658 2090 aaPredicted RBP13.53□□□□□ -0.24
CCNL1-217ENST00000476367 GOLGA8QA0A0J9YX86 632 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 GOLGA8OA6NCC3 632 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 GOLGA8NF8WBI6 632 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 PROM1O43490 865 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 RGS14O43566 566 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 SEC22BO75396 215 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 DNAJB5O75953 348 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 IGHEP01854 428 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 ITGB2P05107 769 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 FAM58BPP0C7Q3 252 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 C8orf89P0DMQ9 161 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 TIA1P31483 386 aaKnown RBP eCLIP13.53□□□□□ -0.244e-7■■■■□ 19.7
CCNL1-217ENST00000476367 IDH3AP50213 366 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 RHDQ02161 417 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 PRSS53Q2L4Q9 553 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 GALNTL6Q49A17 601 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 SPIN4Q56A73 249 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 SPDYAQ5MJ70 313 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 C18orf63Q68DL7 685 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 NOXRED1Q6NXP6 359 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 KIRREL2Q6UWL6 708 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 AMER2Q8N7J2 671 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 NUDT8Q8WV74 236 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 APOBEC4Q8WW27 367 aaKnown RBP13.53□□□□□ -0.24
CCNL1-217ENST00000476367 METTL21AQ8WXB1 218 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 TSLPQ969D9 159 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 METTL2AQ96IZ6 378 aaKnown RBP13.53□□□□□ -0.24
CCNL1-217ENST00000476367 ARHGAP9Q9BRR9 750 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 NPLQ9BXD5 320 aaPredicted RBP13.53□□□□□ -0.24
CCNL1-217ENST00000476367 TRIM55Q9BYV6 548 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 CLK4Q9HAZ1 481 aaKnown RBP13.53□□□□□ -0.24
CCNL1-217ENST00000476367 LYRM4Q9HD34 91 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 VTI1BQ9UEU0 232 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 MCM8Q9UJA3 840 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 FBXL4Q9UKA2 621 aa13.53□□□□□ -0.24
CCNL1-217ENST00000476367 BOD1L1Q8NFC6 3051 aa13.52□□□□□ -0.24
CCNL1-217ENST00000476367 FAM208BQ5VWN6 2430 aa13.52□□□□□ -0.24
CCNL1-217ENST00000476367 PCDH7O60245 1069 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 TGDSO95455 350 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 SDC1P18827 310 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 MAOAP21397 527 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 IL10P22301 178 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 DIO3P55073 304 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 BTG2P78543 158 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 RHAGQ02094 409 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 ACSM2AQ08AH3 577 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 IMPG1Q17R60 797 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 TUBB8Q3ZCM7 444 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 TMEM198Q66K66 360 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 ACSM2BQ68CK6 577 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 CYP20A1Q6UW02 462 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 OR11G2Q8NGC1 345 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 TTC9Q92623 222 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 TUBGCP3Q96CW5 907 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 IP6K3Q96PC2 410 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 HEY2Q9UBP5 337 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 BAIAP2L1Q9UHR4 511 aa13.52□□□□□ -0.25
CCNL1-217ENST00000476367 DOCK10Q96BY6 2186 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 IGHV3-20A0A0C4DH32 117 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 A0A1W2PS29 197 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 ARHGAP10A1A4S6 786 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 SLCO1B7G3V0H7 640 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 ANKRD28O15084 1053 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 PGRMC2O15173 223 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 FAM87AP0C7U9 286 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 BCKDHAP12694 445 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 AQP5P55064 265 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 POLE2P56282 527 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 RPL38P63173 70 aaKnown RBP13.51□□□□□ -0.25
CCNL1-217ENST00000476367 LSM12Q3MHD2 195 aaKnown RBP13.51□□□□□ -0.25
CCNL1-217ENST00000476367 OGFOD2Q6N063 350 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 GPR180Q86V85 440 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 KIRREL3Q8IZU9 778 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 ADAMTS18Q8TE60 1221 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 C16orf78Q8WTQ4 265 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 PTCHD1Q96NR3 888 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 C1orf50Q9BV19 199 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 ING2Q9H160 280 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 NPHS2Q9NP85 383 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 NMRK1Q9NWW6 199 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 AHSPQ9NZD4 102 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 ADAM21Q9UKJ8 722 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 CES1P1Q9UKY3 287 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 MRPS33Q9Y291 106 aaKnown RBP13.51□□□□□ -0.25
CCNL1-217ENST00000476367 SPACA6W5XKT8 324 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 TNRC6AQ8NDV7 1962 aaKnown RBP13.51□□□□□ -0.25
CCNL1-217ENST00000476367 IGSF10Q6WRI0 2623 aa13.51□□□□□ -0.25
CCNL1-217ENST00000476367 PRMT3O60678 531 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 AIFM1O95831 613 aa13.5□□□□□ -0.25
CCNL1-217ENST00000476367 VIMP08670 466 aaKnown RBP13.5□□□□□ -0.25
CCNL1-217ENST00000476367 DRD4P21917 467 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms