RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 UFL1O94874 794 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CALCAP01258 141 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 IGHEP01854 428 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 APRTP07741 180 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 FGF4P08620 206 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TPM1P09493 284 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ANXA4P09525 319 aaPredicted RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ZNF735P0CB33 412 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CT45A8P0DMV1 189 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CT45A9P0DMV2 189 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CCDC130P13994 396 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 DARSP14868 501 aaKnown RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TSPAN8P19075 237 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CCT6AP40227 531 aaKnown RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 PCYT1AP49585 367 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CLCN4P51793 760 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 SUCLG1P53597 346 aaKnown RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 NANOS3P60323 173 aaKnown RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 BNC1Q01954 994 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 DMTNQ08495 405 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TRAF2Q12933 501 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ITGA9Q13797 1035 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 GTF2H2Q13888 395 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 SELPLGQ14242 412 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 KIR2DS5Q14953 304 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 HLFQ16534 295 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 HADHQ16836 314 aaKnown RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TATDN3Q17R31 274 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 MPPE1Q53F39 396 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CT45A2Q5DJT8 189 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 SLC35D3Q5M8T2 416 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ARMC12Q5T9G4 340 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TAF3Q5VWG9 929 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CDC42EP5Q6NZY7 148 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 GTF2H2CQ6P1K8 395 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 SLC27A4Q6P1M0 643 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 FAM171BQ6P995 826 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CWC27Q6UX04 472 aaKnown RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 IL17RELQ6ZVW7 336 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TRMT1LQ7Z2T5 733 aaKnown RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 C16orf62Q7Z3J2 963 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ZNF554Q86TJ5 538 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CCDC60Q8IWA6 550 aaPredicted RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 LRRC43Q8N309 656 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TMEM99Q8N816 258 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CNBD1Q8NA66 436 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 MLKLQ8NB16 471 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 COLGALT1Q8NBJ5 622 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 OR13C5Q8NGS8 318 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 GIMAP1Q8WWP7 306 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TANKQ92844 425 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 OSTF1Q92882 214 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ABTB1Q969K4 478 aaPredicted RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 RASD2Q96D21 266 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 GSDMAQ96QA5 445 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 SLC26A1Q9H2B4 701 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 PNNQ9H307 717 aaKnown RBP3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ZNF665Q9H7R5 613 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CALHM2Q9HA72 323 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 SLC52A3Q9NQ40 469 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 EXOC1Q9NV70 894 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 BARHL2Q9NY43 387 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 MIS18AQ9NYP9 233 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 SIX4Q9UIU6 781 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 PILRAQ9UKJ1 303 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 CFAP45Q9UL16 551 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 SLC7A7Q9UM01 511 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 DLGAP4Q9Y2H0 992 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 OR1A2Q9Y585 309 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 PCDHAC2Q9Y5I4 1007 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TAF1P21675 1872 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 SYNJ1O43426 1573 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 ABCA10Q8WWZ4 1543 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 GRIN2BQ13224 1484 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 IGLV5-52A0A0A0MRZ9 124 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 SERTM2A0A1B0GWG4 89 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 MBLAC1A4D2B0 266 aaPredicted RBP3.8□□□□□ -1.8
VPS13D-207ENST00000476169 LILRA5A6NI73 299 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 YJEFN3A6XGL0 299 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 MEI4A8MW99 385 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 TULP2O00295 520 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 SDHDO14521 159 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 MID1O15344 667 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 B4GAT1O43505 415 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 SDC3O75056 442 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 BCAS1O75363 584 aaPredicted RBP3.8□□□□□ -1.8
VPS13D-207ENST00000476169 GLUD1P00367 558 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 CRYABP02511 175 aaKnown RBP3.8□□□□□ -1.8
VPS13D-207ENST00000476169 PRSS2P07478 247 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 HOXC6P09630 235 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 CYP11B1P15538 503 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 ITGA2P17301 1181 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 GM2AP17900 193 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 HNF1AP20823 631 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 CDC25AP30304 524 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 RFC4P35249 363 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 AHRP35869 848 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 ALDH3B1P43353 468 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 NR4A2P43354 598 aa3.8□□□□□ -1.8
VPS13D-207ENST00000476169 GLUD2P49448 558 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms