RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 DEFB126Q9BYW3 111 aa12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 SHCBP1LQ9BZQ2 653 aa12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 OR8D2Q9GZM6 311 aa12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 ELOVL6Q9H5J4 265 aa12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 ADAP2Q9NPF8 381 aa12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 TEX10Q9NXF1 929 aaPredicted RBP12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 DCDC2Q9UHG0 476 aa12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 SLC12A4Q9UP95 1085 aa12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 ASB4Q9Y574 426 aa12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 RELNP78509 3460 aa12.28□□□□□ -0.44
NIPAL3-206ENST00000475663 CNTRLQ7Z7A1 2325 aa12.27□□□□□ -0.44
NIPAL3-206ENST00000475663 HRKO00198 91 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 FOXE1O00358 373 aaPredicted RBP12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 MANBAO00462 879 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 GLRA3O75311 464 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 AIFM1O95831 613 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 GSTA1P08263 222 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 MYL2P10916 166 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 KRT4P19013 534 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 IMPDH1P20839 514 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 GPR143P51810 404 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 PRKAA2P54646 552 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 MLF1P58340 268 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 TNFRSF17Q02223 184 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 FOLH1Q04609 750 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 CUL3Q13618 768 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 RCN2Q14257 317 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 ZNF766Q5HY98 468 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 MRM1Q6IN84 353 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 FAM180AQ6UWF9 173 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 ZYG11AQ6WRX3 759 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 TDRPQ86YL5 185 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 ZCCHC7Q8N3Z6 543 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 CCDC63Q8NA47 563 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 SERPINI1Q99574 410 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 UTP23Q9BRU9 249 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 C1QTNF3Q9BXJ4 246 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 SLC29A3Q9BZD2 475 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 RPF2Q9H7B2 306 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 DDX31Q9H8H2 851 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 TIMM22Q9Y584 194 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 CLCA3PQ9Y6N3 262 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 SPACA6W5XKT8 324 aa12.27□□□□□ -0.45
NIPAL3-206ENST00000475663 SHANK1Q9Y566 2161 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 ANKUB1A6NFN9 424 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 C17orf105B2RV13 164 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 UBFD1O14562 309 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 COPEO14579 308 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 PGRMC2O15173 223 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 PROM1O43490 865 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 PLIN3O60664 434 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 PRAMEF2O60811 474 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 SEMA7AO75326 666 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 CBX6O95503 412 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 RNF224P0DH78 156 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 PTGER1P34995 402 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 CLCN2P51788 898 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 FOXA1P55317 472 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 IFFO1Q0D2I5 559 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 ELAVL1Q15717 326 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 ZNF750Q32MQ0 723 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 GGTA1PQ4G0N0 100 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 GPRIN3Q6ZVF9 776 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 NUDT13Q86X67 352 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 MDS2Q8NDY4 140 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 SUN3Q8TAQ9 357 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 FAR1Q8WVX9 515 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 L3HYPDHQ96EM0 354 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 VMP1Q96GC9 406 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 ZNF382Q96SR6 550 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 PARD6BQ9BYG5 372 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 RNF32Q9H0A6 362 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 TSPAN10Q9H1Z9 355 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 GSTO2Q9H4Y5 243 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 TNFRSF12AQ9NP84 129 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 ABI3Q9P2A4 366 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 VTI1BQ9UEU0 232 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 TRPS1Q9UHF7 1281 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 PHF11Q9UIL8 331 aa12.26□□□□□ -0.45
NIPAL3-206ENST00000475663 PRRC2CQ9Y520 2896 aaKnown RBP12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 TMEM200CA6NKL6 621 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 WWP2O00308 870 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 CDH16O75309 829 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 SPAG7O75391 227 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 NEURL1O76050 574 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 DDAH2O95865 285 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 NR2F6P10588 404 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 MST1P26927 711 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 SERPINB3P29508 390 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 HMOX2P30519 316 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 CRHR1P34998 444 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 CCT5P48643 541 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 NAGLUP54802 743 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 KCNK10P57789 538 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 HMGCS1Q01581 520 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 GALNT1Q10472 559 aaPredicted RBP12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 UBAP2LQ14157 1087 aaKnown RBP12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 CCNYL2Q5T2Q4 361 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 FAM180BQ6P0A1 224 aa12.25□□□□□ -0.45
NIPAL3-206ENST00000475663 COMMD6Q7Z4G1 85 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms