RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TACR1P25103 407 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 SSR2P43308 183 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 CD97P48960 835 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 RPL14P50914 215 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 HK2P52789 917 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 BTG2P78543 158 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 RHAGQ02094 409 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 GUCY1A3Q02108 690 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 BTKQ06187 659 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 CSTF3Q12996 717 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 SLAMF1Q13291 335 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 AP5B1Q2VPB7 878 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 RFTN2Q52LD8 501 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 C18orf63Q68DL7 685 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 CRYBG3Q68DQ2 2970 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 GALNT18Q6P9A2 607 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 TRIM40Q6P9F5 258 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 KIRREL2Q6UWL6 708 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 RGS9BPQ6ZS82 235 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 LANCL3Q6ZV70 420 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 MAMDC2Q7Z304 686 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 SCUBE1Q8IWY4 988 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 GBP7Q8N8V2 638 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 PPP1R14CQ8TAE6 165 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 RAB3IL1Q8TBN0 382 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 STARD8Q92502 1023 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 TSLPQ969D9 159 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 TBC1D20Q96BZ9 403 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 TM4SF18Q96CE8 201 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 FCRL1Q96LA6 429 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 WDR77Q9BQA1 342 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 NPLQ9BXD5 320 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 SLC7A5P2Q9GIP4 190 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 ILKAPQ9H0C8 392 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 ACBD3Q9H3P7 528 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 CLK4Q9HAZ1 481 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 EML4Q9HC35 981 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 LYRM4Q9HD34 91 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 MKKSQ9NPJ1 570 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF71Q9NQZ8 489 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 INTS9Q9NV88 658 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 TEX10Q9NXF1 929 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 HEY2Q9UBP5 337 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 MARCOQ9UEW3 520 aaPredicted RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 ADAM29Q9UKF5 820 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 EXO1Q9UQ84 846 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 DLGAP4Q9Y2H0 992 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 PTRH2Q9Y3E5 179 aaKnown RBP6.57□□□□□ -1.36
LIMD1-204ENST00000474665 HS3ST3B1Q9Y662 390 aa6.57□□□□□ -1.36
LIMD1-204ENST00000474665 MYOCOSA0A1B0GUC4 107 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 A0A1W2PQ72 361 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 ARHGAP10A1A4S6 786 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 GLOD5A6NK44 160 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 SDHDO14521 159 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 SOCS6O14544 535 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 PGRMC2O15173 223 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 SKAP2O75563 359 aaPredicted RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 RSL1D1O76021 490 aaKnown RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 AIFM1O95831 613 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 FAM58BPP0C7Q3 252 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 MAOAP21397 527 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 MMP11P24347 488 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 PPP2R1BP30154 601 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 SOX18P35713 384 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 TSFMP43897 325 aaKnown RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 RAP1GDS1P52306 607 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 GYS2P54840 703 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 MLLT10P55197 1068 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 RAB38P57729 211 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 RPS15P62841 145 aaKnown RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 PHEXP78562 749 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 TGM3Q08188 693 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 PDCD2Q16342 344 aaPredicted RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 UGT8Q16880 541 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 TUBB8Q3ZCM7 444 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 CRTC2Q53ET0 693 aaPredicted RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 C6orf136Q5SQH8 315 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 VWA5B1Q5TIE3 1220 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 TMEM205Q6UW68 189 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 CLNKQ7Z7G1 428 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 MRGPREQ86SM8 312 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 GPR180Q86V85 440 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 NUDT13Q86X67 352 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 WDR75Q8IWA0 830 aaKnown RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 FAM47BQ8NA70 645 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 PLPP5Q8NEB5 264 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 SRFBP1Q8NEF9 429 aaKnown RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 NUDT8Q8WV74 236 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 SREK1Q8WXA9 508 aaKnown RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 ANKRD9Q96BM1 317 aaPredicted RBP6.56□□□□□ -1.36
LIMD1-204ENST00000474665 MIEF2Q96C03 454 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 C8orf44Q96CB5 159 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 FAR2Q96K12 515 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 EGLN2Q96KS0 407 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 PPP1R36Q96LQ0 422 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 MAGEB18Q96M61 343 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 C7orf26Q96N11 449 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 OR1F2PQ96R84 312 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 EBPLQ9BY08 206 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 NUF2Q9BZD4 464 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms