RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PCDH1Q08174 1060 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 UAP1L1Q3KQV9 507 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 ZNF770Q6IQ21 691 aaPredicted RBP20.12■□□□□ 0.81
COL18A1-207ENST00000473212 BRAT1Q6PJG6 821 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 VN1R2Q8NFZ6 395 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 TP53INP1Q96A56 240 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 WFDC6Q9BQY6 131 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 C3orf14Q9HBI5 128 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 DNAJC27Q9NZQ0 273 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 ANGPT4Q9Y264 503 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 TRAPPC4Q9Y296 219 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 PRKAB1Q9Y478 270 aa20.12■□□□□ 0.81
COL18A1-207ENST00000473212 PIPSLA2A3N6 862 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 FFAR1O14842 300 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 MFN2O95140 757 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 SCG5P05408 212 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 ARAFP10398 606 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 ZNF30P17039 623 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 AZGP1P25311 298 aaKnown RBP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 TGM4P49221 684 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 LIM2P55344 173 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 TLE2Q04725 743 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 ZNF284Q2VY69 593 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 SLX4IPQ5VYV7 408 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 BCDIN3DQ7Z5W3 292 aaKnown RBP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 TECPR1Q7Z6L1 1165 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 SLC34A3Q8N130 599 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 ZNF689Q96CS4 500 aaPredicted RBP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 RC3H2Q9HBD1 1191 aaKnown RBP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 DMRT3Q9NQL9 472 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 SNTG1Q9NSN8 517 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 DDX28Q9NUL7 540 aaKnown RBP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 PCYT1BQ9Y5K3 369 aaPredicted RBP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 WNT6Q9Y6F9 365 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 LINC00854A0A1B0GVQ3 168 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 TLR4O00206 839 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 RTCAO00442 366 aaKnown RBP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 ZNF197O14709 1029 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 LILRB3O75022 631 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 SEMA7AO75326 666 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 IL3P08700 152 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 CYP2A6P11509 494 aaPredicted RBP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 MESP2Q0VG99 397 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 PDE7AQ13946 482 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 PUM1Q14671 1186 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 KLHDC8AQ8IYD2 350 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 ASB15Q8WXK1 588 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 TMCO6Q96DC7 493 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 TRMT61AQ96FX7 289 aaKnown RBP20.11■□□□□ 0.81
COL18A1-207ENST00000473212 MRGPRX3Q96LB0 322 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 SLC25A19Q9HC21 320 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 NPAP1Q9NZP6 1156 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 NOTCH4Q99466 2003 aa20.11■□□□□ 0.81
COL18A1-207ENST00000473212 A0A1W2PRB8 838 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 A8MV72 311 aaPredicted RBP20.1■□□□□ 0.81
COL18A1-207ENST00000473212 WWP2O00308 870 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 CAPN5O15484 640 aaPredicted RBP20.1■□□□□ 0.81
COL18A1-207ENST00000473212 CSO75390 466 aaKnown RBP20.1■□□□□ 0.81
COL18A1-207ENST00000473212 TEAD2Q15562 447 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 LIPIQ6XZB0 460 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 LAX1Q8IWV1 398 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 REPS1Q96D71 796 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 ZSCAN5AQ9BUG6 496 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 SLC6A16Q9GZN6 736 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 GPBP1L1Q9HC44 474 aaPredicted RBP20.1■□□□□ 0.81
COL18A1-207ENST00000473212 LSM2Q9Y333 95 aaKnown RBP20.1■□□□□ 0.81
COL18A1-207ENST00000473212 V9GYH0 126 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 POLR2EP19388 210 aaKnown RBP20.1■□□□□ 0.81
COL18A1-207ENST00000473212 GPR50Q13585 617 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 BAK1Q16611 211 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 TRIM60Q495X7 471 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 FAM71E1Q6IPT2 247 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 TNFAIP8L2Q6P589 184 aaPredicted RBP20.1■□□□□ 0.81
COL18A1-207ENST00000473212 KRT73Q86Y46 540 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 LAS2Q8IYD9 372 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 IRF7Q92985 503 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 OR2AG1Q9H205 316 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 SPATA7Q9P0W8 599 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 XIRP2A4UGR9 3374 aa20.1■□□□□ 0.81
COL18A1-207ENST00000473212 ELFN1P0C7U0 828 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 PIPP12273 146 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-207ENST00000473212 CSTF2P33240 577 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL18A1-207ENST00000473212 RFX2P48378 723 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 DCDC1P59894 354 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 RHAGQ02094 409 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL18A1-207ENST00000473212 ARMC4Q5T2S8 1044 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 ZNF517Q6ZMY9 492 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-207ENST00000473212 TRAPPC5Q8IUR0 188 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 FOPNLQ96NB1 174 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 OR2B2Q9GZK3 357 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 CXorf36Q9H7Y0 433 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 SLAMF7Q9NQ25 335 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 CCDC177Q9NQR7 707 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-207ENST00000473212 WASH3PC4AMC7 463 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 KRT75O95678 551 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 SYN1P17600 705 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 XPAP23025 273 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-207ENST00000473212 ALDH9A1P49189 494 aa20.09■□□□□ 0.81
COL18A1-207ENST00000473212 DSTNP60981 165 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms