RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 SH3BGRLO75368 114 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 SCELO95171 688 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 C1QAP02745 245 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 SLC35E2BP0CK96 405 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 COX7A2P14406 83 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 CPN2P22792 545 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 STX2P32856 288 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 GMPRP36959 345 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 CASP2P42575 452 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 RNF4P78317 190 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 ID2Q02363 134 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 C2orf54Q08AI8 447 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 E2F2Q14209 437 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 SYT10Q6XYQ8 523 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 MEX3BQ6ZN04 569 aaKnown RBP18.32■□□□□ 0.52
COL9A3-210ENST00000472880 RGS9BPQ6ZS82 235 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 SLC22A16Q86VW1 577 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 CCDC25Q86WR0 208 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 LAS2Q8IYD9 372 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 MARVELD2Q8N4S9 558 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 ZNF321PQ8N8H1 164 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 C7orf57Q8NEG2 295 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 OR5L2Q8NGL0 311 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 UBTD2Q8WUN7 234 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 ASB5Q8WWX0 329 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 C14orf79Q96F83 325 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 CMTM7Q96FZ5 175 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 TTTY12Q9BZ98 90 aa18.32■□□□□ 0.52
COL9A3-210ENST00000472880 UTP11Q9Y3A2 253 aaKnown RBP18.32■□□□□ 0.52
COL9A3-210ENST00000472880 A0A0G2JMM0 328 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 A0A1W2PPB8 328 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 A0A1W2PRS3 328 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 KIR3DP1A8MWS1 328 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 G3V3Y1 287 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 K7EPI3 171 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 UBXN8O00124 270 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 FAM155BO75949 473 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 TGFB1P01137 390 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 CRABP2P29373 138 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 RAP1GDS1P52306 607 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 PLTPP55058 493 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 CAV1Q03135 178 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 NDUFAF5Q5TEU4 345 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 KHDRBS2Q5VWX1 349 aaKnown RBP18.31■□□□□ 0.52
COL9A3-210ENST00000472880 OPN5Q6U736 354 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 ISCA2Q86U28 154 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 GOLM1Q8NBJ4 401 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 OR7G3Q8NG95 312 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 RND1Q92730 232 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 SCYL1Q96KG9 808 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 ATOH8Q96SQ7 321 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 FAM173AQ9BQD7 235 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 CENPKQ9BS16 269 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 ENKD1Q9H0I2 346 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 ZDHHC11Q9H8X9 412 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 PDZD2O15018 2839 aa18.31■□□□□ 0.52
COL9A3-210ENST00000472880 SAP18O00422 153 aaKnown RBP18.3■□□□□ 0.52
COL9A3-210ENST00000472880 DYRK3O43781 588 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 LTA4HP09960 611 aaKnown RBP18.3■□□□□ 0.52
COL9A3-210ENST00000472880 CHRNB4P30926 498 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 DLG1Q12959 904 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 NAB1Q13506 487 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 DDX39BQ13838 428 aaKnown RBP18.3■□□□□ 0.52
COL9A3-210ENST00000472880 ZNF750Q32MQ0 723 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 GRHL2Q6ISB3 625 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 MYLK4Q86YV6 388 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-210ENST00000472880 ANKRD9Q96BM1 317 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-210ENST00000472880 SGCZQ96LD1 299 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 DGAT2Q96PD7 388 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 RAB17Q9H0T7 212 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 OR51B5Q9H339 312 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 SACM1LQ9NTJ5 587 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 ADGRE2Q9UHX3 823 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 RNF6Q9Y252 685 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 ANGPTL3Q9Y5C1 460 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 HRH3Q9Y5N1 445 aa18.3■□□□□ 0.52
COL9A3-210ENST00000472880 CSMD2Q7Z408 3487 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 FAM90A27PA6NNH2 459 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 SYCE1LA8MT33 242 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 NPIPA2E9PIF3 369 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 NPIPA3F8WFD2 350 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 FGF17O60258 216 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 ETHE1O95571 254 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 P04436 131 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 EPB42P16452 691 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 POU3F2P20265 443 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-210ENST00000472880 CNR1P21554 472 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 STT3AP46977 705 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 PLIN5Q00G26 463 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 TLE4Q04727 773 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 OR4C11Q6IEV9 310 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 FAM47EQ6ZV65 393 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 FAM109AQ8N4B1 249 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 RPRMLQ8N4K4 120 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 ACBD4Q8NC06 268 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 OR5M3Q8NGP4 307 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 FBF1Q8TES7 1133 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 ZNF721Q8TF20 911 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 ART5Q96L15 291 aa18.29■□□□□ 0.52
COL9A3-210ENST00000472880 SMC6Q96SB8 1091 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms