RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 IGLV3-12A0A075B6K2 115 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 FAM227AF5H4B4 570 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 CYR61O00622 381 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 AKAP10O43572 662 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 CTNSO60931 367 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 DNAJB6O75190 326 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 SLC22A3O75751 556 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 CDC123O75794 336 aaPredicted RBP15.88■□□□□ 0.13
CCM2-205ENST00000472223 LRATO95237 230 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 AIFM1O95831 613 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 CYC1P08574 325 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 COX7A2P14406 83 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 DDCP20711 480 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 TACR1P25103 407 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 ATP4BP51164 291 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 EMP2P54851 167 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 SNRPNP63162 240 aaKnown RBP15.88■□□□□ 0.13
CCM2-205ENST00000472223 DNASE1L3Q13609 305 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 ERV3-1Q14264 604 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 SQLEQ14534 574 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 PTGR1Q14914 329 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 PDCD4Q53EL6 469 aaKnown RBP15.88■□□□□ 0.13
CCM2-205ENST00000472223 TMEM198Q66K66 360 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 FAM71E1Q6IPT2 247 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 MRPL14Q6P1L8 145 aaKnown RBP15.88■□□□□ 0.13
CCM2-205ENST00000472223 COX15Q7KZN9 410 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 PIGWQ7Z7B1 504 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 ENDOVQ8N8Q3 282 aaKnown RBP15.88■□□□□ 0.13
CCM2-205ENST00000472223 GLB1L3Q8NCI6 653 aaPredicted RBP15.88■□□□□ 0.13
CCM2-205ENST00000472223 ZNF248Q8NDW4 579 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 OR4K14Q8NGD5 310 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 GFM2Q969S9 779 aaKnown RBP15.88■□□□□ 0.13
CCM2-205ENST00000472223 PTCHD1Q96NR3 888 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 CRB3Q9BUF7 120 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 SOX17Q9H6I2 414 aaPredicted RBP15.88■□□□□ 0.13
CCM2-205ENST00000472223 SLC22A11Q9NSA0 550 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 ZIM2Q9NZV7 527 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 SH3BP4Q9P0V3 963 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 CTSFQ9UBX1 484 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 C19orf25Q9UFG5 118 aaPredicted RBP15.88■□□□□ 0.13
CCM2-205ENST00000472223 UTS2RQ9UKP6 389 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 ENTPD4Q9Y227 616 aa15.88■□□□□ 0.13
CCM2-205ENST00000472223 GLOD5A6NK44 160 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 VSTM2BA6NLU5 285 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 PCDH17O14917 1159 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 DYRK3O43781 588 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 ERAL1O75616 437 aaKnown RBP15.87■□□□□ 0.13
CCM2-205ENST00000472223 DCTN3O75935 186 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 ALDOCP09972 364 aaKnown RBP15.87■□□□□ 0.13
CCM2-205ENST00000472223 PTPN4P29074 926 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 NME5P56597 212 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 SRSF11Q05519 484 aaKnown RBP15.87■□□□□ 0.13
CCM2-205ENST00000472223 SERTAD2Q14140 314 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 DPY19L1Q2PZI1 675 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 CPTPQ5TA50 214 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 C6orf163Q5TEZ5 329 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 LCN10Q6JVE6 187 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 QSOX2Q6ZRP7 698 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 MED25Q71SY5 747 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 DTX1Q86Y01 620 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 ZC3H7AQ8IWR0 971 aaKnown RBP15.87■□□□□ 0.13
CCM2-205ENST00000472223 CCDC197Q8NCU1 140 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 VPS37AQ8NEZ2 397 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 KCNE4Q8WWG9 221 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 KLHL29Q96CT2 875 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 EGLN2Q96KS0 407 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 MARK4Q96L34 752 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 BBS4Q96RK4 519 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 CSF3RQ99062 836 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 BRINP2Q9C0B6 783 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 AKIRIN1Q9H9L7 192 aaPredicted RBP15.87■□□□□ 0.13
CCM2-205ENST00000472223 SEMA3GQ9NS98 782 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 C3orf18Q9UK00 162 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 GPR45Q9Y5Y3 372 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 CROCCQ5TZA2 2017 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 SCN2AQ99250 2005 aa15.87■□□□□ 0.13
CCM2-205ENST00000472223 RRP8O43159 456 aaKnown RBP15.86■□□□□ 0.13
CCM2-205ENST00000472223 GPR75O95800 540 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 NTSP30990 170 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 MC1RQ01726 317 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 NSDHLQ15738 373 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 PGS1Q32NB8 556 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 SLC48A1Q6P1K1 146 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 FAM198BQ6UWH4 519 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 SHISA6Q6ZSJ9 500 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 TICAM1Q8IUC6 712 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 OR2Y1Q8NGV0 311 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 EXOSC8Q96B26 276 aaKnown RBP15.86■□□□□ 0.13
CCM2-205ENST00000472223 RBM18Q96H35 190 aaKnown RBP15.86■□□□□ 0.13
CCM2-205ENST00000472223 PELOQ9BRX2 385 aaKnown RBP15.86■□□□□ 0.13
CCM2-205ENST00000472223 DPH1Q9BZG8 443 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 SDR39U1Q9NRG7 319 aaPredicted RBP15.86■□□□□ 0.13
CCM2-205ENST00000472223 TMEM45AQ9NWC5 275 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 TCFL5Q9UL49 500 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 SPTBN2O15020 2390 aa15.86■□□□□ 0.13
CCM2-205ENST00000472223 LOC101059948A0A1B0GTJ6 334 aa15.85■□□□□ 0.13
CCM2-205ENST00000472223 IDSB3KWA1 339 aa15.85■□□□□ 0.13
CCM2-205ENST00000472223 SCAMP2O15127 329 aaKnown RBP15.85■□□□□ 0.13
CCM2-205ENST00000472223 PGRMC2O15173 223 aa15.85■□□□□ 0.13
CCM2-205ENST00000472223 OR10H2O60403 315 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms