RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TPOP07202 933 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 CCL3P10147 92 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 ABOP16442 354 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 GP5P40197 560 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SSR4P51571 173 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SLC12A2P55011 1212 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 MTTPP55157 894 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 RPS13P62277 151 aaKnown RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 AP2B1P63010 937 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 RNF4P78317 190 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 FOXO1Q12778 655 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 ASPHQ12797 758 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SLAMF1Q13291 335 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 E2F2Q14209 437 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SLMAPQ14BN4 828 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.48□□□□□ -1.21
USP48-207ENST00000471752 DEPDC1Q5TB30 811 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 GRTP1Q5TC63 336 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 BICRALQ6AI39 1079 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 LYPD8Q6UX82 237 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 CYS1Q717R9 158 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 LIX1LQ8IVB5 337 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 C9orf40Q8IXQ3 194 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 ZNF595Q8IYB9 648 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 LAS2Q8IYD9 372 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 MMP21Q8N119 569 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 LGI4Q8N135 537 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 KRT78Q8N1N4 520 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 GHDCQ8N2G8 530 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 TMEM156Q8N614 296 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 ZFP62Q8NB50 900 aaPredicted RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 PSD4Q8NDX1 1056 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SIMC1Q8NDZ2 872 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 OR2M7Q8NG81 312 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 C16orf52Q8NHV5 167 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 HUS1BQ8NHY5 278 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 GABPB2Q8TAK5 448 aaPredicted RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 FAM57AQ8TBR7 257 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SLC2A12Q8TD20 617 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 NRGNQ92686 78 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SDCCAG3Q96C92 435 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 PTCD3Q96EY7 689 aaKnown RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 VMP1Q96GC9 406 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SENP5Q96HI0 755 aaPredicted RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 MAGED4Q96JG8 741 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 NSUN5Q96P11 429 aaKnown RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 SERINC2Q96SA4 455 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 NPLQ9BXD5 320 aaPredicted RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 CLK4Q9HAZ1 481 aaKnown RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 NPDC1Q9NQX5 325 aaPredicted RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 PNPLA3Q9NST1 481 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 TUBA8Q9NY65 449 aaPredicted RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 GPRC5BQ9NZH0 403 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 MYOTQ9UBF9 498 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SUCOQ9UBS9 1254 aaKnown RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 DMGDHQ9UI17 866 aaKnown RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 ITGB1BP2Q9UKP3 347 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 RNF6Q9Y252 685 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 MED12Q93074 2177 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 URADA6NGE7 173 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 NPIPA2E9PIF3 369 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 NPIPA3F8WFD2 350 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 CLDN4O14493 209 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 PLPP1O14494 284 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 OR7A17O14581 309 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 TFECO14948 347 aaPredicted RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 GLSO94925 669 aaPredicted RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 ALDOAP04075 364 aaKnown RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 IGKV3-11P04433 115 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 SBK3P0C264 359 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 TNNI3P19429 210 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 HIST1H1TP22492 207 aaPredicted RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 SPRP35270 261 aaPredicted RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 PTGS2P35354 604 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 BSGP35613 385 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 SOX18P35713 384 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 MAGEA5P43359 124 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 WNT3P56703 355 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 NUP107P57740 925 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 ATP6V0D1P61421 351 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 PPIAP62937 165 aaKnown RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 RBPJQ06330 500 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 TFF3Q07654 80 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 PMPCAQ10713 525 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 STX4Q12846 297 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 ELAVL1Q15717 326 aaKnown RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 TBCCQ15814 346 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 PFKFB4Q16877 469 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 GXYLT1Q4G148 440 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 KHDRBS2Q5VWX1 349 aaKnown RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 OR4C11Q6IEV9 310 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 FAM180BQ6P0A1 224 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 TRIM40Q6P9F5 258 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 XKRXQ6PP77 449 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 RAPH1Q70E73 1250 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 TMEM251Q8N6I4 163 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 ACBD4Q8NC06 268 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 ARMC2Q8NEN0 867 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 UHMK1Q8TAS1 419 aaKnown RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 WNT2BQ93097 391 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms